RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 A0A1W2PRX2 142 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 CCRL2O00421 344 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 VHLP40337 213 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 GP2P55259 537 aaKnown RBP18.26■□□□□ 0.51
SNF8-209ENST00000510558 ZNF816Q0VGE8 651 aaPredicted RBP18.26■□□□□ 0.51
SNF8-209ENST00000510558 GPR50Q13585 617 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 SPHARQ15513 63 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 BEAN1Q3B7T3 259 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 C8orf31Q8N9H6 132 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 OR4K15Q8NH41 348 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 TMED9Q9BVK6 235 aa18.26■□□□□ 0.51
SNF8-209ENST00000510558 C12orf77C9JDV5 145 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 IGKV1D-33P01593 117 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 IGKV1-33P01594 117 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 GAPDHP04406 335 aaKnown RBP18.25■□□□□ 0.51
SNF8-209ENST00000510558 FUT3P21217 361 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 REG1BP48304 166 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 TCTEX1D4Q5JR98 221 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 C6orf183Q5T699 404 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 SIGIRRQ6IA17 410 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 GAPTQ8N292 157 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 FAM46BQ96A09 425 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 RAB9BQ9NP90 201 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 GHRLQ9UBU3 117 aa18.25■□□□□ 0.51
SNF8-209ENST00000510558 NOTCH3Q9UM47 2321 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 IGHV1-3A0A0C4DH29 117 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 H0YHG0 523 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 SPINT2O43291 252 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 CA11O75493 328 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 SC5DO75845 299 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 GLAP06280 429 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 SLC35A2P78381 396 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 HNF4GQ14541 408 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 MED22Q15528 200 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 Q3ZCU0 254 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 C10orf99Q6UWK7 81 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 MOB3BQ86TA1 216 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 C5orf56Q8N8D9 126 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 OR4X2Q8NGF9 303 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 CYYR1Q96J86 154 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 CST11Q9H112 138 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 PRKDCP78527 4128 aaKnown RBP18.24■□□□□ 0.51
SNF8-209ENST00000510558 TGP01266 2768 aa18.24■□□□□ 0.51
SNF8-209ENST00000510558 TCRBV4S1A1TA0A5B7 111 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 UBE2QL1A1L167 161 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 FGF16O43320 207 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 PDCD6O75340 191 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 HBZP02008 142 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 IL3RAP26951 378 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 IRF3Q14653 427 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 TMEM30BQ3MIR4 351 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 RBM48Q5RL73 367 aaKnown RBP18.23■□□□□ 0.51
SNF8-209ENST00000510558 KPRPQ5T749 579 aaPredicted RBP18.23■□□□□ 0.51
SNF8-209ENST00000510558 TRAT1Q6PIZ9 186 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 LRRTM1Q86UE6 522 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 PRR18Q8N4B5 295 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 PHYHIPQ92561 330 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 GNG12Q9UBI6 72 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 TPRKBQ9Y3C4 175 aa18.23■□□□□ 0.51
SNF8-209ENST00000510558 TSSC4Q9Y5U2 329 aaPredicted RBP18.23■□□□□ 0.51
SNF8-209ENST00000510558 IGHV3-72A0A0B4J1Y9 119 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 SLC31A2O15432 143 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 MPIG6BO95866 241 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 UBBP0CG47 229 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 RCC1P18754 421 aaPredicted RBP18.22■□□□□ 0.51
SNF8-209ENST00000510558 EBI3Q14213 229 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 GLT8D1Q68CQ7 371 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 CEACAM19Q7Z692 300 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 IZUMO1Q8IYV9 350 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 OR1L1Q8NH94 360 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 ST6GALNAC6Q969X2 333 aa18.22■□□□□ 0.51
SNF8-209ENST00000510558 PF4V1P10720 104 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 MYF6P23409 242 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 HSD17B12Q53GQ0 312 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 OXLD1Q5BKU9 147 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 C1orf100Q5SVJ3 147 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 SLC25A48Q6ZT89 311 aaKnown RBP18.21■□□□□ 0.51
SNF8-209ENST00000510558 ZNF439Q8NDP4 499 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 OR10V1Q8NGI7 309 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 RTN4IP1Q8WWV3 396 aaPredicted RBP18.21■□□□□ 0.51
SNF8-209ENST00000510558 UFD1Q92890 307 aa18.21■□□□□ 0.51
SNF8-209ENST00000510558 PSMB11A5LHX3 300 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 VSIG8P0DPA2 414 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 SRMP19623 302 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 KHDC1LQ5JSQ8 128 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 NKAPLQ5M9Q1 402 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 LIPKQ5VXJ0 399 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 OR10K2Q6IF99 312 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 EAF1Q96JC9 268 aaPredicted RBP18.2■□□□□ 0.5
SNF8-209ENST00000510558 ANKRD60Q9BZ19 345 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 DUSP21Q9H596 190 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 TAF9BQ9HBM6 251 aa18.2■□□□□ 0.5
SNF8-209ENST00000510558 MBNL3Q9NUK0 354 aaKnown RBP18.2■□□□□ 0.5
SNF8-209ENST00000510558 UCHL1P09936 223 aa18.19■□□□□ 0.5
SNF8-209ENST00000510558 ZNF134P52741 427 aa18.19■□□□□ 0.5
SNF8-209ENST00000510558 ZNF137PP52743 207 aa18.19■□□□□ 0.5
SNF8-209ENST00000510558 CT45A1Q5HYN5 189 aa18.19■□□□□ 0.5
SNF8-209ENST00000510558 OR2T10Q8NGZ9 312 aa18.19■□□□□ 0.5
SNF8-209ENST00000510558 CT45A3Q8NHU0 189 aa18.19■□□□□ 0.5
SNF8-209ENST00000510558 MRPL30Q8TCC3 161 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms