RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 PI3P19957 117 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 WNT5AP41221 380 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 CRYBA2P53672 197 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 DVL1P1P54792 670 aaPredicted RBP4.36□□□□□ -1.71
PHF3-210ENST00000509876 ARL16Q0P5N6 197 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 UBE2V2Q15819 145 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 ZNF66Q6ZN08 573 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 DAZAP1Q96EP5 407 aaKnown RBP4.36□□□□□ -1.71
PHF3-210ENST00000509876 ACY3Q96HD9 319 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 Q96MF0 132 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 NRIP2Q9BQI9 281 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 METTL1Q9UBP6 276 aaKnown RBP4.36□□□□□ -1.71
PHF3-210ENST00000509876 TMED3Q9Y3Q3 217 aa4.36□□□□□ -1.71
PHF3-210ENST00000509876 DPRXA6NFQ7 191 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 OR4E1P0C645 316 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 PPT1P50897 306 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 BLOC1S1P78537 153 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 SSX2Q16385 188 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 LRRTM1Q86UE6 522 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 THNSL2Q86YJ6 484 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 ZNF645Q8N7E2 425 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 NABP1Q96AH0 204 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 ARPC5LQ9BPX5 153 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 LINC00312Q9Y6C7 94 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 CLEC18AA5D8T8 446 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 TSPAN15O95858 294 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 FCGR3AP08637 254 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 CLINT1Q14677 625 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 ZNF788Q6ZQV5 615 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 DMRTC2Q8IXT2 367 aaPredicted RBP4.35□□□□□ -1.71
PHF3-210ENST00000509876 FAM216BQ8N7L0 139 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 WDR31Q8NA23 367 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 RELL2Q8NC24 303 aaPredicted RBP4.35□□□□□ -1.71
PHF3-210ENST00000509876 CLEC18CQ8NCF0 446 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 DUSP18Q8NEJ0 188 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 DYRK2Q92630 601 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 SEC22AQ96IW7 307 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 TMEM147Q9BVK8 224 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 HIF1ANQ9NWT6 349 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 TAS2R3Q9NYW6 316 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 HSF4Q9ULV5 492 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 PQLC2LA1A4F0 135 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 ZNF785A8K8V0 405 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 M0QZK8 103 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 WNT9BO14905 357 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 HPRT1P00492 218 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 PPYP01298 95 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 UBA52P62987 128 aaKnown RBP4.35□□□□□ -1.71
PHF3-210ENST00000509876 C1orf100Q5SVJ3 147 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 UNQ9370/PRO34162Q6UXP9 181 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 TBC1D26Q86UD7 250 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 ZNF546Q86UE3 836 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 HOGA1Q86XE5 327 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 WDFY2Q96P53 400 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 RSRP1Q9BUV0 290 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 C20orf24Q9BUV8 137 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 NPFFR1Q9GZQ6 430 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 TMEM165Q9HC07 324 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 KLK11Q9UBX7 282 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 TRAV39A0A0B4J263 110 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 E5RGE8 158 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 CTDSPLO15194 276 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 KCNAB3O43448 404 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 F12P00748 615 aaPredicted RBP4.35□□□□□ -1.71
PHF3-210ENST00000509876 SNRNP70P08621 437 aaKnown RBP4.35□□□□□ -1.71
PHF3-210ENST00000509876 GATA3P23771 443 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 FAAP20Q6NZ36 180 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 SEC22CQ9BRL7 303 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 DPM3Q9P2X0 92 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 NSG2Q9Y328 171 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 TIMM9Q9Y5J7 89 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 E7EQL1 145 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 M0R036 132 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 LMX1BO60663 402 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 ALX3O95076 343 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 SRD5A1P18405 259 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 WDFY1Q8IWB7 410 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 OR4X2Q8NGF9 303 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 ASB13Q8WXK3 278 aa4.35□□□□□ -1.71
PHF3-210ENST00000509876 IGKV3-15P01624 115 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 MMP7P09237 267 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 GAPTQ8N292 157 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 TCTEX1D1Q8N7M0 179 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 ZNRF1Q8ND25 227 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 OR1L8Q8NGR8 309 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 GSTZ1O43708 216 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 SFT2D2O95562 160 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 PGA5P0DJD9 388 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 FOXG1P55316 489 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 CTF1Q16619 201 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 ACOT6Q3I5F7 207 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 NRARPQ7Z6K4 114 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 BVESQ8NE79 360 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 SLC25A28Q96A46 364 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 Q96M66 194 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 ZNF649Q9BS31 505 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 NDFIP1Q9BT67 221 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 ZNF436Q9C0F3 470 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 OR51I2Q9H344 312 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms