RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 GFI1Q99684 422 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 PDCD1LG2Q9BQ51 273 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 RPP25Q9BUL9 199 aaKnown RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 C5orf66Q9H5L9 145 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 NOX3Q9HBY0 568 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 WDR83OSQ9Y284 106 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 WIPI2Q9Y4P8 454 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ARFGEF1Q9Y6D6 1849 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 LRRC37AA6NMS7 1700 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 AHDC1Q5TGY3 1603 aaPredicted RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 STRCQ7RTU9 1775 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 MYH10P35580 1976 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TRAV18A0A075B6X5 111 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 DAPL1A0PJW8 107 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 INMT-MINDY4F8WBC2 141 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 MOSP00540 346 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 FAM157CP0CG43 387 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 RPL7P18124 248 aaKnown RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 IMPA1P29218 277 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 BLVRBP30043 206 aaPredicted RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 PPIFP30405 207 aaKnown RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 OPRD1P41143 372 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 CXCL12P48061 93 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 EMP1P54849 157 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TAS2R20P59543 309 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 RPS14P62263 151 aaKnown RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 GNG5P63218 68 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 PAFAH1B3Q15102 231 aaKnown RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 SIX1Q15475 284 aaPredicted RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ST3GAL2Q16842 350 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 SYT14P1Q58G82 188 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ALG10BQ5I7T1 473 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TMEM244Q5VVB8 128 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 GLT8D1Q68CQ7 371 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 OR10K2Q6IF99 312 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 IL34Q6ZMJ4 242 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF705AQ6ZN79 300 aaPredicted RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 BCDIN3DQ7Z5W3 292 aaKnown RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 CMC1Q7Z7K0 106 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 SLC47A2Q86VL8 602 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 GKN2Q86XP6 184 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 BEST3Q8N1M1 668 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TPRX1Q8N7U7 411 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 LRRC57Q8N9N7 239 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 C5orf17Q8NAS9 161 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ACVR1CQ8NER5 493 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 OR8G5Q8NG78 346 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 OR2G3Q8NGZ4 309 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 THEM6Q8WUY1 208 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 SECTM1Q8WVN6 248 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TFAP2CQ92754 450 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF681Q96N22 645 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ERMAPQ96PL5 475 aaPredicted RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TSPAN32Q96QS1 320 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 CLCC1Q96S66 551 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 GINS4Q9BRT9 223 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 PRRG4Q9BZD6 226 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 OR8D2Q9GZM6 311 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TMEM133Q9H2Q1 129 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 AAMDCQ9H7C9 122 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 SAP30LQ9HAJ7 183 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 HES4Q9HCC6 221 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 MMP26Q9NRE1 261 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 CBLN4Q9NTU7 201 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 TECRQ9NZ01 308 aaKnown RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 FLRT3Q9NZU0 649 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF319Q9P2F9 582 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 ANXA10Q9UJ72 324 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 PILRAQ9UKJ1 303 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 VDAC3Q9Y277 283 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 RNF11Q9Y3C5 154 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 RAI2Q9Y5P3 530 aa3.77□□□□□ -1.81
NIPBL-206ENST00000509429 GREB1LQ9C091 1923 aaPredicted RBP3.77□□□□□ -1.81
NIPBL-206ENST00000509429 RGPD3A6NKT7 1758 aaPredicted RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 RGPD4Q7Z3J3 1758 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 PRSS51A0A1B0GVH4 220 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 C15orf61A6NNL5 157 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 CXorf49A8MYA2 514 aaPredicted RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 C9JAW5 83 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 J3QR89 54 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF593O00488 134 aaPredicted RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 GAPDHSO14556 408 aaPredicted RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 SPRY2O43597 315 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 PRKNO60260 465 aaPredicted RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 YIF1AO95070 293 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 CDRT1O95170 752 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 SOX14O95416 240 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 CLDN1O95832 211 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 MAS1P04201 325 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 OR5G3P0C626 314 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 FAM106CPP0CH98 169 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 RAB5AP20339 215 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 RPA3P35244 121 aaPredicted RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 G6PCP35575 357 aa3.76□□□□□ -1.81
NIPBL-206ENST00000509429 RPL29P47914 159 aaKnown RBP3.76□□□□□ -1.81
NIPBL-206ENST00000509429 EMDP50402 254 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms