RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 RASL11BQ9BPW5 248 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 MCRIP2Q9BUT9 160 aaKnown RBP12.15□□□□□ -0.46
TPM3-219ENST00000509409 SPACA1Q9HBV2 294 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 RAB9BQ9NP90 201 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 ETAA1Q9NY74 926 aa12.15□□□□□ -0.46
TPM3-219ENST00000509409 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
TPM3-219ENST00000509409 PNMA8CA0A1B0GUJ8 204 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 AP4M1O00189 453 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 GPX5O75715 221 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 MAS1P04201 325 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 CD1BP29016 333 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 RAB25P57735 213 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 PNLIPRP3Q17RR3 467 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 SYT6Q5T7P8 510 aaPredicted RBP12.14□□□□□ -0.47
TPM3-219ENST00000509409 DMKNQ6E0U4 476 aaPredicted RBP12.14□□□□□ -0.47
TPM3-219ENST00000509409 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 ETV3LQ6ZN32 361 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 TGIF2LXQ8IUE1 241 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 SETD9Q8NE22 299 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 OR4K15Q8NH41 348 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 GGHQ92820 318 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 PEX16Q9Y5Y5 336 aa12.14□□□□□ -0.47
TPM3-219ENST00000509409 TRAV8-7A0A075B6U6 113 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 MAGEA13PA6NCF6 341 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 MOSP00540 346 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 SLC6A1P30531 599 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 GPR12P47775 334 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 ST3GAL4Q11206 333 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 VAX1Q5SQQ9 334 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 C6orf183Q5T699 404 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 AWAT2Q6E213 333 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 RAB12Q6IQ22 244 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 ZNF695Q8IW36 515 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 IZUMO1Q8IYV9 350 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 DHRSXQ8N5I4 330 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 C8orf31Q8N9H6 132 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 Q8N9W7 124 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 OR10V1Q8NGI7 309 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 RTN4IP1Q8WWV3 396 aaPredicted RBP12.13□□□□□ -0.47
TPM3-219ENST00000509409 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 SELENOIQ9C0D9 397 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 ABCG5Q9H222 651 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 BANF2Q9H503 90 aa12.13□□□□□ -0.47
TPM3-219ENST00000509409 C12orf77C9JDV5 145 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 SLC31A2O15432 143 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 CRTAPO75718 401 aaPredicted RBP12.12□□□□□ -0.47
TPM3-219ENST00000509409 CAPGP40121 348 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 TAS2R43P59537 309 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 RPS11P62280 158 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM3-219ENST00000509409 EGFEM1PQ0D2K5 195 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 Q3ZCU0 254 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 CXorf66Q5JRM2 361 aaPredicted RBP12.12□□□□□ -0.47
TPM3-219ENST00000509409 OR1L1Q8NH94 360 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 MRPS24Q96EL2 167 aaKnown RBP12.12□□□□□ -0.47
TPM3-219ENST00000509409 OR14A2Q96R54 314 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 S1PR3Q99500 378 aa12.12□□□□□ -0.47
TPM3-219ENST00000509409 LIN7CQ9NUP9 197 aaKnown RBP12.12□□□□□ -0.47
TPM3-219ENST00000509409 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
TPM3-219ENST00000509409 TRBV5-7A0A0A0MS05 114 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 UBE2QL1A1L167 161 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 EFCAB10A6NFE3 127 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 ZNF736B4DX44 427 aaPredicted RBP12.11□□□□□ -0.47
TPM3-219ENST00000509409 CCL24O00175 119 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
TPM3-219ENST00000509409 HBZP02008 142 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
TPM3-219ENST00000509409 FSTP19883 344 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 CD69Q07108 199 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 GPR50Q13585 617 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 CT45A1Q5HYN5 189 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
TPM3-219ENST00000509409 Q8N6K4 173 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 CT45A3Q8NHU0 189 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 ST6GALNAC6Q969X2 333 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 PGLYRP3Q96LB9 341 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 DCLRE1BQ9H816 532 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 KCNIP1Q9NZI2 227 aa12.11□□□□□ -0.47
TPM3-219ENST00000509409 TXNL1O43396 289 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 MGMTP16455 207 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
TPM3-219ENST00000509409 CELP19835 753 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 FUT3P21217 361 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 VHLP40337 213 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 ZNF134P52741 427 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 F2RL1P55085 397 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 TMEM30BQ3MIR4 351 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 TRAT1Q6PIZ9 186 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 LCNL1Q6ZST4 164 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 CDH26Q8IXH8 852 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 TMEM104Q8NE00 496 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 OR8H1Q8NGG4 311 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 RAX2Q96IS3 184 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 P2RX4Q99571 388 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 OR2S2Q9NQN1 319 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 C8orf4Q9NR00 106 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 PLSCR3Q9NRY6 295 aa12.1□□□□□ -0.47
TPM3-219ENST00000509409 RCC2Q9P258 522 aaKnown RBP12.1□□□□□ -0.47
TPM3-219ENST00000509409 MYL12BO14950 172 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms