RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 KCNJ3P48549 501 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 ADAM5Q6NVV9 412 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 Q6ZS49 121 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
PHF3-209ENST00000509330 SIGLEC5O15389 551 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 ADAM20O43506 726 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 SCO1O75880 301 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 CD40P25942 277 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 CD177Q8N6Q3 437 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 COQ2Q96H96 371 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 BOD1Q96IK1 185 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 C18orf12Q96KH6 178 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 PIEZO1Q92508 2521 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 K7EPK0 472 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 PGLYRP1O75594 196 aaPredicted RBP12.51□□□□□ -0.41
PHF3-209ENST00000509330 RRASP10301 218 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 PSG2P11465 335 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 TESK1Q15569 626 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 RPL7L1Q6DKI1 246 aaKnown RBP12.51□□□□□ -0.41
PHF3-209ENST00000509330 H1FOOQ8IZA3 346 aaPredicted RBP12.51□□□□□ -0.41
PHF3-209ENST00000509330 FAM71E2Q8N5Q1 922 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 ZNRF1Q8ND25 227 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 POM121Q96HA1 1249 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 TMEM222Q9H0R3 208 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 HES4Q9HCC6 221 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 DCAF16Q9NXF7 216 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 PCDHB10Q9UN67 800 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 SPEF1Q9Y4P9 236 aa12.51□□□□□ -0.41
PHF3-209ENST00000509330 C12orf77C9JDV5 145 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 TPD52L2O43399 206 aaKnown RBP12.5□□□□□ -0.41
PHF3-209ENST00000509330 PET100P0DJ07 73 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 AANATQ16613 207 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 EIF2S3LQ2VIR3 472 aaKnown RBP12.5□□□□□ -0.41
PHF3-209ENST00000509330 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 LILRB1Q8NHL6 650 aaPredicted RBP12.5□□□□□ -0.41
PHF3-209ENST00000509330 COQ3Q9NZJ6 369 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 LRBAP50851 2863 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 A0A1B0GW55 424 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 C16orf97H3BN30 126 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DEDDO75618 318 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 CTXN2P0C2S0 81 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4L2P0CJ85 424 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4L3P0CJ86 424 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4L4P0CJ87 422 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4L5P0CJ88 424 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4L6P0CJ89 424 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4L7P0CJ90 424 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 HKR1P10072 659 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 OMGP23515 440 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 RPL12P30050 165 aaKnown RBP12.5□□□□□ -0.41
PHF3-209ENST00000509330 IL2RGP31785 369 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 CD80P33681 288 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 GLRXP35754 106 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 TMPRSS3P57727 454 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 SMIM21Q3B7S5 101 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 ZNF880Q6PDB4 577 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4L9Q6RFH8 374 aaPredicted RBP12.5□□□□□ -0.41
PHF3-209ENST00000509330 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 ANGPTL6Q8NI99 470 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 SDHAF2Q9NX18 166 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 DUX4Q9UBX2 424 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 GLS2Q9UI32 602 aa12.5□□□□□ -0.41
PHF3-209ENST00000509330 FBXO24O75426 580 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 GLAP06280 429 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 PPP1CCP36873 323 aaKnown RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 MDH2P40926 338 aaKnown RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 LINC00205P59089 165 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
PHF3-209ENST00000509330 NKX6-1P78426 367 aaPredicted RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 GCSAMQ8N6F7 178 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 ERGIC1Q969X5 290 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 IFT22Q9H7X7 185 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 CYTL1Q9NRR1 136 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 RCL1Q9Y2P8 373 aaKnown RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 TMEM30CPA0ZSE6 113 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 CYB5R3P00387 301 aaPredicted RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 EDDM3BP56851 147 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 CCL8P80075 99 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 CXorf66Q5JRM2 361 aaPredicted RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 SELENOHQ8IZQ5 122 aaKnown RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 RNASE11Q8TAA1 199 aaKnown RBP12.49□□□□□ -0.41
PHF3-209ENST00000509330 ABCA4P78363 2273 aa12.49□□□□□ -0.41
PHF3-209ENST00000509330 A0A0G2JRQ6 117 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 PRDX2P32119 198 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 BSPH1Q075Z2 132 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 BTNL3Q6UXE8 466 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 RBMXL1Q96E39 390 aaKnown RBP12.48□□□□□ -0.41
PHF3-209ENST00000509330 MEGF10Q96KG7 1140 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 KCNIP1Q9NZI2 227 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 H7C1Q1 480 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 HBZP02008 142 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 CABLES2Q9BTV7 478 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 TUBD1Q9UJT1 453 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms