RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 RPUSD1Q9UJJ7 312 aaKnown RBP8.59□□□□□ -1.03
RFC1-211ENST00000509084 JPT1Q9UK76 154 aa8.59□□□□□ -1.03
RFC1-211ENST00000509084 SPTAN1Q13813 2472 aaKnown RBP8.58□□□□□ -1.04
RFC1-211ENST00000509084 TRBV6-7A0A0A0MS04 114 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 KBTBD11-OT1A0A1B0GTJ5 212 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 hCG_1809904A0A1W2PP81 198 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 A0A1W2PPE2 198 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 A0A1W2PR64 198 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 A0A1W2PRV1 198 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 C15orf65H3BRN8 121 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 ENSAO43768 121 aaKnown RBP8.58□□□□□ -1.04
RFC1-211ENST00000509084 HBZP02008 142 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 RBP4P02753 201 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 LIPFP07098 398 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 SCTP09683 121 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 GSTT2P0CG29 244 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 OR5H8P0DN80 308 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 CGB3P0DN86 165 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 CGB7P0DN87 165 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 ZBTB25P24278 435 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 FPR2P25090 351 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 SLC6A1P30531 599 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 SSTR5P35346 364 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 RFX2P48378 723 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 SEC61A1P61619 476 aaKnown RBP8.58□□□□□ -1.04
RFC1-211ENST00000509084 LMO4P61968 165 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 RBMS2Q15434 407 aaKnown RBP8.58□□□□□ -1.04
RFC1-211ENST00000509084 TREML4Q6UXN2 200 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 BTN2A1Q7KYR7 527 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 OR52M1Q8NGK5 317 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 OR6F1Q8NGZ6 308 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 OR10J5Q8NHC4 309 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 KIRREL1Q96J84 757 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 SCGB3A2Q96PL1 93 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 LINC00574Q9H8X3 128 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 C19orf12Q9NSK7 152 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 SLC23A1Q9UHI7 598 aa8.58□□□□□ -1.04
RFC1-211ENST00000509084 USF3Q68DE3 2245 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 TRAV39A0A0B4J263 110 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 PPIAL4CA0A0B4J2A2 164 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 F2RL2O00254 374 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 BET1O15155 118 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 HSPA12AO43301 675 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 FCN3O75636 299 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 RGS11O94810 467 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 ZNF735P0CB33 412 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 ZNF728P0DKX0 622 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 PPIAL4GP0DN37 164 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 USF1P22415 310 aaPredicted RBP8.57□□□□□ -1.04
RFC1-211ENST00000509084 HERV-K104P61576 105 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 HERPUD1Q15011 391 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 TRIM16LQ309B1 348 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 SCGB2B2Q4G0G5 96 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 IGSF11Q5DX21 431 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 TMEM200BQ69YZ2 307 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 FAAP20Q6NZ36 180 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 PLET1Q6UQ28 207 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 TCF23Q7RTU1 214 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 FGFRL1Q8N441 504 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 KIR3DL3Q8N743 410 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 LY6G5BQ8NDX9 201 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 DUSP18Q8NEJ0 188 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 OR4D10Q8NGI6 311 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 OR51S1Q8NGJ8 323 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 OR56B4Q8NH76 319 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 GIMAP1Q8WWP7 306 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 IL1F10Q8WWZ1 152 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 FOXC2Q99958 501 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 SLC25A21Q9BQT8 299 aaPredicted RBP8.57□□□□□ -1.04
RFC1-211ENST00000509084 TOLLIPQ9H0E2 274 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 IDI2-AS1Q9NZ38 188 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 ZNF69Q9UC07 566 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 POLR3KQ9Y2Y1 108 aaPredicted RBP8.57□□□□□ -1.04
RFC1-211ENST00000509084 NUBP2Q9Y5Y2 271 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 MAST4O15021 2626 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 LRBAP50851 2863 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 DCHS2Q6V1P9 2916 aa8.57□□□□□ -1.04
RFC1-211ENST00000509084 IGHV4-61A0A0C4DH41 118 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 SDCBPO00560 298 aaPredicted RBP8.56□□□□□ -1.04
RFC1-211ENST00000509084 FCGR2CP31995 323 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 BTCP35070 178 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 LOXL1Q08397 574 aaPredicted RBP8.56□□□□□ -1.04
RFC1-211ENST00000509084 ZNF273Q14593 569 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 OXA1LQ15070 435 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 SURF2Q15527 256 aaPredicted RBP8.56□□□□□ -1.04
RFC1-211ENST00000509084 C17orf58Q2M2W7 97 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 Q3ZCU0 254 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 LY6G6FQ5SQ64 297 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 DHRS11Q6UWP2 260 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 HEPN1Q6WQI6 88 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 NRARPQ7Z6K4 114 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 LHFPL1Q86WI0 220 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 ZDHHC22Q8N966 263 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 OR1L1Q8NH94 360 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 TERB2Q8NHR7 220 aa8.56□□□□□ -1.04
RFC1-211ENST00000509084 CHPT1Q8WUD6 406 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms