RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 GLAP06280 429 aa7□□□□□ -1.29
SNCA-211ENST00000508895 HIST1H1DP16402 221 aaKnown RBP7□□□□□ -1.29
SNCA-211ENST00000508895 CDK2P24941 298 aa7□□□□□ -1.29
SNCA-211ENST00000508895 RANBP1P43487 201 aa7□□□□□ -1.29
SNCA-211ENST00000508895 TMBIM6P55061 237 aa7□□□□□ -1.29
SNCA-211ENST00000508895 RAG2P55895 527 aa7□□□□□ -1.29
SNCA-211ENST00000508895 BPIFB3P59826 476 aa7□□□□□ -1.29
SNCA-211ENST00000508895 BLMHQ13867 455 aa7□□□□□ -1.29
SNCA-211ENST00000508895 RBM39Q14498 530 aaKnown RBP7□□□□□ -1.29
SNCA-211ENST00000508895 PLA1AQ53H76 456 aa7□□□□□ -1.29
SNCA-211ENST00000508895 NCR3LG1Q68D85 454 aa7□□□□□ -1.29
SNCA-211ENST00000508895 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
SNCA-211ENST00000508895 Q6ZS46 218 aa7□□□□□ -1.29
SNCA-211ENST00000508895 C5orf24Q7Z6I8 188 aa7□□□□□ -1.29
SNCA-211ENST00000508895 OR10R2Q8NGX6 335 aa7□□□□□ -1.29
SNCA-211ENST00000508895 OR4K15Q8NH41 348 aa7□□□□□ -1.29
SNCA-211ENST00000508895 LINC01006Q8NI28 216 aa7□□□□□ -1.29
SNCA-211ENST00000508895 UBALD1Q8TB05 177 aa7□□□□□ -1.29
SNCA-211ENST00000508895 CCDC107Q8WV48 283 aa7□□□□□ -1.29
SNCA-211ENST00000508895 SSMEM1Q8WWF3 244 aa7□□□□□ -1.29
SNCA-211ENST00000508895 ISOC1Q96CN7 298 aa7□□□□□ -1.29
SNCA-211ENST00000508895 RBMXL1Q96E39 390 aaKnown RBP7□□□□□ -1.29
SNCA-211ENST00000508895 KIRREL1Q96J84 757 aa7□□□□□ -1.29
SNCA-211ENST00000508895 NEDD4LQ96PU5 975 aa7□□□□□ -1.29
SNCA-211ENST00000508895 BCL7BQ9BQE9 202 aa7□□□□□ -1.29
SNCA-211ENST00000508895 FAAP24Q9BTP7 215 aa7□□□□□ -1.29
SNCA-211ENST00000508895 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
SNCA-211ENST00000508895 MBNL3Q9NUK0 354 aaKnown RBP7□□□□□ -1.29
SNCA-211ENST00000508895 HSF4Q9ULV5 492 aa7□□□□□ -1.29
SNCA-211ENST00000508895 SPATA2Q9UM82 520 aa7□□□□□ -1.29
SNCA-211ENST00000508895 CEPT1Q9Y6K0 416 aa7□□□□□ -1.29
SNCA-211ENST00000508895 SESN1Q9Y6P5 492 aa7□□□□□ -1.29
SNCA-211ENST00000508895 VWFP04275 2813 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 IGHV2-26A0A0B4J1V2 119 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 KBTBD11-OT1A0A1B0GTJ5 212 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 C12orf77C9JDV5 145 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 NPIPB11E5RHQ5 1161 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 H3BUI4 141 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 H3BUX3 64 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 TMEM127O75204 238 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 CA11O75493 328 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 NDUFA7O95182 113 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 GNB3P16520 340 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 RCC1P18754 421 aaPredicted RBP6.99□□□□□ -1.29
SNCA-211ENST00000508895 CD34P28906 385 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 PROK1P58294 105 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 GUCA2AQ02747 115 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 FOXL1Q12952 345 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 UBE2NLQ5JXB2 153 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 ZNF626Q68DY1 528 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 ZNF880Q6PDB4 577 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 CROCCP3Q8IVE0 287 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 TMEM86BQ8N661 226 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 BEND2Q8NDZ0 799 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 KCTD12Q96CX2 325 aaKnown RBP6.99□□□□□ -1.29
SNCA-211ENST00000508895 RAB3CQ96E17 227 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 SSX3Q99909 188 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 MEGF9Q9H1U4 602 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 ATG5Q9H1Y0 275 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 TMEM133Q9H2Q1 129 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 ZMAT3Q9HA38 289 aaKnown RBP6.99□□□□□ -1.29
SNCA-211ENST00000508895 ZNF286AQ9HBT8 521 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 C12orf4Q9NQ89 552 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 PLEKHJ1Q9NW61 149 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 ABRACLQ9P1F3 81 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 ELF5Q9UKW6 265 aaPredicted RBP6.99□□□□□ -1.29
SNCA-211ENST00000508895 MMP24Q9Y5R2 645 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 POMT1Q9Y6A1 747 aa6.99□□□□□ -1.29
SNCA-211ENST00000508895 A0A075B6Q4 140 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 A0A087X0M5 115 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 TRBV6-6A0A0A6YYG2 114 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 A0A1B0GX30 115 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 hCG_1809904A0A1W2PP81 198 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 A0A1W2PPE2 198 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 A0A1W2PR64 198 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 A0A1W2PRV1 198 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 METTL21EPA6NDL7 271 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 TMEM235A6NFC5 223 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 ORC5O43913 435 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 EIF4EP06730 217 aaKnown RBP6.98□□□□□ -1.29
SNCA-211ENST00000508895 FBP1P09467 338 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 LOXL3P58215 753 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 HABP2Q14520 560 aaPredicted RBP6.98□□□□□ -1.29
SNCA-211ENST00000508895 HMGN3Q15651 99 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 FAM189A2Q15884 450 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 LTC4SQ16873 150 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 C6orf183Q5T699 404 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 Q6ZTK2 550 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 MOB1BQ7L9L4 216 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 SAMD12Q8N8I0 201 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 OR11H6Q8NGC7 330 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 OR4P4Q8NGL7 312 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 OR1L1Q8NH94 360 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 RFESDQ8TAC1 157 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 DYNC2LI1Q8TCX1 351 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 CLEC7AQ9BXN2 247 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNCA-211ENST00000508895 IDI2-AS1Q9NZ38 188 aa6.98□□□□□ -1.29
SNCA-211ENST00000508895 CCDC59Q9P031 241 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms