RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 OR10G7Q8NGN6 311 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 OR1J4Q8NGS1 313 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 WDR34Q96EX3 536 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 SLC25A44Q96H78 314 aaPredicted RBP3.34□□□□□ -1.88
NEDD4-209ENST00000508871 DOHHQ9BU89 302 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 GALPQ9UBC7 116 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM272A0A1B0GTI8 110 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 K7ESM1 405 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 FAM106CPP0CH98 169 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 PSG1P11464 419 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 CA6P23280 308 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 RPS23P62266 143 aaKnown RBP3.34□□□□□ -1.88
NEDD4-209ENST00000508871 OR7A5Q15622 319 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 C20orf204Q6ZNR8 217 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 ARPINQ7Z6K5 226 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 OR2A1Q8NGT9 310 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 ERMAPQ96PL5 475 aaPredicted RBP3.34□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM147Q9BVK8 224 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 HEBP1Q9NRV9 189 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 CCL26Q9Y258 94 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 YTHDF2Q9Y5A9 579 aaKnown RBP3.34□□□□□ -1.88
NEDD4-209ENST00000508871 MEIKINA0A087WXM9 373 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF705GA8MUZ8 300 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PRR32B1ATL7 298 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SMKR1H3BMG3 65 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GFYI3L273 518 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PLPP3O14495 311 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 LYPLA1O75608 230 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OR2A4O95047 310 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PSMB5P28074 263 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 HBA1P69905 142 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ADORA2A-AS1P86434 159 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 CD47Q08722 323 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RPEL1Q2QD12 228 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 CYBRD1Q53TN4 286 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 EIF5AL1Q6IS14 154 aaKnown RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 HAGHLQ6PII5 290 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM25Q86YD3 366 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 LRRC25Q8N386 305 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM252Q8N6L7 170 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OR13C8Q8NGS7 320 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RPEQ96AT9 228 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PPCDCQ96CD2 204 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PHYHIPLQ96FC7 376 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OR2A7Q96R45 310 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OR52B2Q96RD2 323 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SCN3BQ9NY72 215 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TRAV9-1A0A075B6T8 112 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OR5H14A6NHG9 310 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 NDUFS5O43920 106 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PAK4O96013 591 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TACSTD2P09758 323 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GKN3PP0CG01 181 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SMIM10L1P0DMW3 83 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF14P17017 642 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 COX7A1P24310 79 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 HRH1P35367 487 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TAS2R19P59542 299 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 CDC42P60953 191 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PPP2CBP62714 309 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 MRPS21P82921 87 aaKnown RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 CD164Q04900 197 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 MMDQ15546 238 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF181Q2M3W8 571 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RASL11AQ6T310 242 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 C22orf34Q6ZV56 151 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 STPG4Q8N801 248 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SMIM10Q96HG1 83 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 VN1R1Q9GZP7 353 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PELI2Q9HAT8 420 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 DEPPQ9NTK1 212 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PILRBQ9UKJ0 227 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 HS3ST3A1Q9Y663 406 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZAR1LA6NP61 321 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 EEF1E1-BLOC1S5C9J1V9 151 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 FOXH1O75593 365 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RFPL2O75678 378 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GPX5O75715 221 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SCO1O75880 301 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TTRP02766 147 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SLC35E2P0CK97 266 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TNFRSF1BP20333 461 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GFERP55789 205 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ADAM8P78325 824 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RUNX3Q13761 415 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SHHQ15465 462 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SOWAHCQ53LP3 525 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF620Q6ZNG0 422 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TCF24Q7RTU0 167 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 C20orf196Q8IYI0 205 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 CANT1Q8WVQ1 401 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RAB37Q96AX2 223 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RDH12Q96NR8 316 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GABARAPL3Q9BY60 117 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 WDR13Q9H1Z4 485 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 LYRM2Q9NU23 88 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PLA2G2EQ9NZK7 142 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms