RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RPL5P46777 297 aaKnown RBP7.26□□□□□ -1.25
NEDD9-211ENST00000508546 EFNB1P98172 346 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 SMN1Q16637 294 aaKnown RBP7.26□□□□□ -1.25
NEDD9-211ENST00000508546 AADACL4Q5VUY2 407 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 TMEM244Q5VVB8 128 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 ACSM6Q6P461 480 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 TMEM65Q6PI78 240 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 ZNF773Q6PK81 442 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 BCDIN3DQ7Z5W3 292 aaKnown RBP7.26□□□□□ -1.25
NEDD9-211ENST00000508546 LYPD6Q86Y78 171 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 Q8N1Y9 231 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 PRSS35Q8N3Z0 413 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 LINC00311Q8N616 119 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 C8orf31Q8N9H6 132 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 OR8J1Q8NGP2 316 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 RHOXF1Q8NHV9 184 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 RFESDQ8TAC1 157 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 DLX4Q92988 240 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-211ENST00000508546 RFT1Q96AA3 541 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 SPATA25Q9BR10 227 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 BARHL1Q9BZE3 327 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 KLK15Q9H2R5 256 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 GHITMQ9H3K2 345 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 VCX3AQ9NNX9 186 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 H2AFY2Q9P0M6 372 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-211ENST00000508546 AASSQ9UDR5 926 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 TPRKBQ9Y3C4 175 aa7.26□□□□□ -1.25
NEDD9-211ENST00000508546 TRAV24A0A0B4J272 114 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 A0A1W2PPE3 182 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 A0A1W2PQL4 384 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 DPPA5A6NC42 116 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 FAM90A10PA6NDY2 464 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 APOL3O95236 402 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 ISG15P05161 165 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 TFAP2AP05549 437 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 OR2T7P0C7T2 308 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 DBTP11182 482 aaKnown RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 SSTR5P35346 364 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 REG1BP48304 166 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 KCNJ3P48549 501 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 MTNR1BP49286 362 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 F2RL1P55085 397 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 SNRPGP62308 76 aaKnown RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 GALEQ14376 348 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 SRSF7Q16629 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 LTC4SQ16873 150 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 PAN3Q58A45 887 aaKnown RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 RSBN1Q5VWQ0 802 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 FAM53AQ6NSI3 398 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 AHSA2Q719I0 299 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 GID4Q8IVV7 300 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 RDH10Q8IZV5 341 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 OR52M1Q8NGK5 317 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 MRGPRDQ8TDS7 321 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 TRUB1Q8WWH5 349 aaKnown RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 RTN4IP1Q8WWV3 396 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 FGGYQ96C11 551 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 SPACA5Q96QH8 159 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 IL4I1Q96RQ9 567 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 PLCXD1Q9NUJ7 323 aa7.25□□□□□ -1.25
NEDD9-211ENST00000508546 PAK1IP1Q9NWT1 392 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 ZNF107Q9UII5 783 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-211ENST00000508546 A6NHS1 94 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 PTGES3LE9PB15 166 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 HSPB6O14558 160 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 HSPA12AO43301 675 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 TXNL1O43396 289 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 RGS10O43665 173 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 HTR1AP08908 422 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 OR8U9P0C7N5 309 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 OCM2P0CE71 109 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 OCMP0CE72 109 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-211ENST00000508546 ZNF20P17024 532 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 GZMHP20718 246 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 IL3RAP26951 378 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 RAB9AP51151 201 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 GTF2A1P52655 376 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-211ENST00000508546 ZNF137PP52743 207 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 SLURP1P55000 103 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 Q3ZCU0 254 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 MEDAGQ5VYS4 303 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 ELP2Q6IA86 826 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 SATL1Q86VE3 508 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 TCEANCQ8N8B7 351 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 IL17DQ8TAD2 202 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 TMEM163Q8TC26 289 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 RNF166Q96A37 237 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-211ENST00000508546 Q96MT0 163 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 OR5B12Q96R08 314 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 TBX5Q99593 518 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 CCDC90BQ9GZT6 254 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 DUSP21Q9H596 190 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 NEK6Q9HC98 313 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 TPSG1Q9NRR2 321 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 WARS2Q9UGM6 360 aaKnown RBP7.24□□□□□ -1.25
NEDD9-211ENST00000508546 MRPS28Q9Y2Q9 187 aaKnown RBP7.24□□□□□ -1.25
NEDD9-211ENST00000508546 KMT2AQ03164 3969 aa7.24□□□□□ -1.25
NEDD9-211ENST00000508546 SMIM31A0A1B0GVY4 71 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 EFCAB10A6NFE3 127 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms