RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 A0A1W2PPI3 338 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 OOSP1A8MZH6 123 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
LMNA-222ENST00000508500 GPX5O75715 221 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 BDKRB2P30411 391 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 CEACAM3P40198 252 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 RBM11P57052 281 aaKnown RBP12.89□□□□□ -0.35
LMNA-222ENST00000508500 LIPKQ5VXJ0 399 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 Q6ZPA2 131 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 OSR2Q8N2R0 312 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 PHYHIPQ92561 330 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 GHSRQ92847 366 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 CREB3L1Q96BA8 519 aa12.89□□□□□ -0.35
LMNA-222ENST00000508500 CPNE2Q96FN4 548 aaPredicted RBP12.89□□□□□ -0.35
LMNA-222ENST00000508500 TRDV1A0A1B0GX56 115 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 C15orf65H3BRN8 121 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 SNRNP70P08621 437 aaKnown RBP12.88□□□□□ -0.35
LMNA-222ENST00000508500 CELP19835 753 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 SERPINA2P20848 420 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 GADD45AP24522 165 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 KCNJ3P48549 501 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 GNG10P50151 68 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 CENPVQ7Z7K6 275 aaPredicted RBP12.88□□□□□ -0.35
LMNA-222ENST00000508500 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 OR4F17Q8NGA8 305 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 CAPSLQ8WWF8 208 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 THRSPQ92748 146 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 OR4F4Q96R69 305 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 METTL9Q9H1A3 318 aa12.88□□□□□ -0.35
LMNA-222ENST00000508500 TRBV5-7A0A0A0MS05 114 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 A0A1W2PPK0 400 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
LMNA-222ENST00000508500 MNDAP41218 407 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 LINC00299Q6ZSB3 139 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 LYPD6Q86Y78 171 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 WFDC9Q8NEX5 89 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 OR10A7Q8NGE5 316 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 OR56B4Q8NH76 319 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 UBALD1Q8TB05 177 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 TOMM40LQ969M1 308 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 RPEQ96AT9 228 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 AKR1E2Q96JD6 320 aa12.87□□□□□ -0.35
LMNA-222ENST00000508500 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
LMNA-222ENST00000508500 COL7A1Q02388 2944 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 H3BUI4 141 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 PIN1P1O15428 100 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 ARHGDIBP52566 201 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 PPP3R1P63098 170 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 Q499Y3 187 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 CCDC144NLQ6NUI1 221 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 PHF21AQ96BD5 680 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 OR51E2Q9H255 320 aa12.86□□□□□ -0.35
LMNA-222ENST00000508500 TCRBV4S1A1TA0A5B7 111 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 MT-ND4P03905 459 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 CSTBP04080 98 aaKnown RBP12.85□□□□□ -0.35
LMNA-222ENST00000508500 IGLL1P15814 213 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 FSTP19883 344 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 LOXL3P58215 753 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 SLC22A6Q4U2R8 563 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 YIF1BQ5BJH7 314 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 C9orf152Q5JTZ5 239 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 C5orf56Q8N8D9 126 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 CCDC107Q8WV48 283 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 RBMXL1Q96E39 390 aaKnown RBP12.85□□□□□ -0.35
LMNA-222ENST00000508500 OR14A2Q96R54 314 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 MOB4Q9Y3A3 225 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 AMMECR1Q9Y4X0 333 aaPredicted RBP12.85□□□□□ -0.35
LMNA-222ENST00000508500 A3GALT2U3KPV4 340 aa12.85□□□□□ -0.35
LMNA-222ENST00000508500 PNMA8CA0A1B0GUJ8 204 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 TMEM30CPA0ZSE6 113 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 FAM106CPP0CH98 169 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 GZMHP20718 246 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 MADCAM1Q13477 382 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 ATAD3CQ5T2N8 411 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 ZNF497Q6ZNH5 498 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 LINC00596Q86U02 117 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
LMNA-222ENST00000508500 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
LMNA-222ENST00000508500 TXNL4BQ9NX01 149 aaKnown RBP12.84□□□□□ -0.35
LMNA-222ENST00000508500 RCC2Q9P258 522 aaKnown RBP12.84□□□□□ -0.35
LMNA-222ENST00000508500 TSSC4Q9Y5U2 329 aaPredicted RBP12.84□□□□□ -0.35
LMNA-222ENST00000508500 IGHV3-43A0A0B4J1X8 118 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 LOC100506127A0A0U1RQW1 187 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 LINC01548A6NM66 108 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 M0QZK8 103 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 SLC31A2O15432 143 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 SC5DO75845 299 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 IGHV3-43DP0DP04 118 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 GTF2F2P13984 249 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 MAPK3P27361 379 aaPredicted RBP12.83□□□□□ -0.36
LMNA-222ENST00000508500 REG1BP48304 166 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 SERPINB10P48595 397 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms