RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 LCNL1Q6ZST4 164 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 ZFP41Q8N8Y5 198 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 MUL1Q969V5 352 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 RBMXL1Q96E39 390 aaKnown RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 RAX2Q96IS3 184 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 B9D2Q9BPU9 175 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 BABAM2Q9NXR7 383 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 SMPD3Q9NY59 655 aaPredicted RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 TRAPPC2LQ9UL33 140 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 DIMT1Q9UNQ2 313 aaKnown RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 MRPS28Q9Y2Q9 187 aaKnown RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 EXOSC1Q9Y3B2 195 aaKnown RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 TRAV8-7A0A075B6U6 113 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 H0YHG0 523 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 CCL24O00175 119 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 BAG2O95816 211 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 MOSP00540 346 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 CD1BP29016 333 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 DGCR2P98153 550 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 GPR50Q13585 617 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 GPR176Q14439 515 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 Q3ZCU0 254 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 Q499Y3 187 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 CXorf66Q5JRM2 361 aaPredicted RBP9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 SYT6Q5T7P8 510 aaPredicted RBP9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 DMKNQ6E0U4 476 aaPredicted RBP9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 PRR18Q8N4B5 295 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF439Q8NDP4 499 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 OR10V1Q8NGI7 309 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 OR4K15Q8NH41 348 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 TFAP2CQ92754 450 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 GHSRQ92847 366 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 RDH12Q96NR8 316 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 S1PR3Q99500 378 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 RASL11BQ9BPW5 248 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 HSPB9Q9BQS6 159 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 GON7Q9BXV9 100 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 DCLRE1BQ9H816 532 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 SPACA1Q9HBV2 294 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 PLSCR3Q9NRY6 295 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 ETAA1Q9NY74 926 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 RCC2Q9P258 522 aaKnown RBP9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 GNG12Q9UBI6 72 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 CKLFQ9UBR5 152 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 CLEC2DQ9UHP7 191 aa9.06□□□□□ -0.96
HMGCS1-204ENST00000507293 MCRIP1C9JLW8 97 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 SPINT2O43291 252 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 TXNL1O43396 289 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 RRP9O43818 475 aaKnown RBP9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 GPX5O75715 221 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 FSTP19883 344 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 LUMP51884 338 aaPredicted RBP9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF137PP52743 207 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 RPS11P62280 158 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 FOXE3Q13461 319 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 DCTN2Q13561 401 aaKnown RBP9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 TMEM30BQ3MIR4 351 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 YIF1BQ5BJH7 314 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 CT45A1Q5HYN5 189 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 C6orf183Q5T699 404 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 AWAT2Q6E213 333 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 RAB12Q6IQ22 244 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 GLIPR1L1Q6UWM5 242 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 SLC25A48Q6ZT89 311 aaKnown RBP9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 JAGN1Q8N5M9 183 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 OR8U1Q8NH10 309 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 CT45A3Q8NHU0 189 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 CYYR1Q96J86 154 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 PGLYRP3Q96LB9 341 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 OR14A2Q96R54 314 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 BANF2Q9H503 90 aa9.05□□□□□ -0.96
HMGCS1-204ENST00000507293 DNAH9Q9NYC9 4486 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 TRBV5-7A0A0A0MS05 114 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 PNMA8CA0A1B0GUJ8 204 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 A0A1W2PPK0 400 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 HBZP02008 142 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 ELANEP08246 267 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 VDAC1P21796 283 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 CDX1P47902 265 aaPredicted RBP9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF134P52741 427 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 F2RL1P55085 397 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 GP2P55259 537 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 CFHR3Q02985 330 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 MED21Q13503 144 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 KIR2DS1Q14954 304 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 FAM71E2Q8N5Q1 922 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 RNF152Q8N8N0 203 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 OR8H1Q8NGG4 311 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 OR5M8Q8NGP6 311 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 TMEM80Q96HE8 168 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 RAB9BQ9NP90 201 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 CHCHD3Q9NX63 227 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 ZMAT5Q9UDW3 170 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 PEX16Q9Y5Y5 336 aa9.04□□□□□ -0.96
HMGCS1-204ENST00000507293 COL7A1Q02388 2944 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 RAMP3O60896 148 aa9.03□□□□□ -0.96
HMGCS1-204ENST00000507293 IGHG4P01861 327 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms