RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FBXL15Q9H469 300 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 FAM118AQ9NWS6 357 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 NDUFAF4Q9P032 175 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 LAMP5Q9UJQ1 280 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 GAB2Q9UQC2 676 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 V9GYS6 101 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 RIIAD1A6NNX1 92 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 SDCBPO00560 298 aaPredicted RBP5.31□□□□□ -1.56
VCAN-207ENST00000507162 SLC31A2O15432 143 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 GADD45GO95257 159 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 SERPINA3P01011 423 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 IFNGP01579 166 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 IGLV3-1P01715 115 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 TTRP02766 147 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 CSN2P05814 226 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 FOLR2P14207 255 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 EDN2P20800 178 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 FCGR2BP31994 310 aaPredicted RBP5.31□□□□□ -1.56
VCAN-207ENST00000507162 VHLP40337 213 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 CRIP2P52943 208 aaPredicted RBP5.31□□□□□ -1.56
VCAN-207ENST00000507162 ATP1B3P54709 279 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 SMIM11AP58511 58 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 TSPAN31Q12999 210 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 LSAMPQ13449 338 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 ODF4Q2M2E3 257 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 ANKRD55Q3KP44 614 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 AKIRIN2Q53H80 203 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 PAN3Q58A45 887 aaKnown RBP5.31□□□□□ -1.56
VCAN-207ENST00000507162 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 PVRIGQ6DKI7 326 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 LINC00596Q86U02 117 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 LINC00311Q8N616 119 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 CHST4Q8NCG5 386 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 OR10A7Q8NGE5 316 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 OR8D4Q8NGM9 314 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 SNAPC3Q92966 411 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 RFT1Q96AA3 541 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 CCDC140Q96MF4 163 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 NR1H4Q96RI1 486 aaPredicted RBP5.31□□□□□ -1.56
VCAN-207ENST00000507162 FUZQ9BT04 418 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 MROQ9BYG7 248 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 LINC00574Q9H8X3 128 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 TECRQ9NZ01 308 aaKnown RBP5.31□□□□□ -1.56
VCAN-207ENST00000507162 UBQLN2Q9UHD9 624 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 DHDHQ9UQ10 334 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 CDH10Q9Y6N8 788 aa5.31□□□□□ -1.56
VCAN-207ENST00000507162 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 FAT1Q14517 4588 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 BMPR1BO00238 502 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 TXNL1O43396 289 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 E2F6O75461 281 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 GSTP1P09211 210 aaKnown RBP5.3□□□□□ -1.56
VCAN-207ENST00000507162 RBP2P50120 134 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 MTCP1P56278 107 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 ZNF829Q3KNS6 432 aaPredicted RBP5.3□□□□□ -1.56
VCAN-207ENST00000507162 BCL2L15Q5TBC7 163 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 METTL21CQ5VZV1 264 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 ZNF57Q68EA5 555 aaPredicted RBP5.3□□□□□ -1.56
VCAN-207ENST00000507162 RPL13AP3Q6NVV1 102 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 SLC25A48Q6ZT89 311 aaKnown RBP5.3□□□□□ -1.56
VCAN-207ENST00000507162 UBE2DNLQ8IWF7 75 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 CENPSQ8N2Z9 138 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 POC5Q8NA72 575 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 BVESQ8NE79 360 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 NPBQ8NG41 125 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 OR11H2Q8NH07 326 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 OR4A5Q8NH83 315 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 ARL11Q969Q4 196 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 FAM162AQ96A26 154 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 TTTY10Q9BZA0 68 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 COMMD4Q9H0A8 199 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 ZC4H2Q9NQZ6 224 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 INTS9Q9NV88 658 aaKnown RBP5.3□□□□□ -1.56
VCAN-207ENST00000507162 NUFIP1Q9UHK0 495 aaKnown RBP5.3□□□□□ -1.56
VCAN-207ENST00000507162 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
VCAN-207ENST00000507162 IGKV1-12A0A0C4DH73 117 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 A0A1B0GTI1 187 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 C2orf70A6NJV1 201 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 LOC110117498-PIK3R3F6TDL0 507 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 H0YJX3 145 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 FXYD1O00168 92 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 LGALS9O00182 355 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 MRASO14807 208 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 GATBO75879 557 aaKnown RBP5.29□□□□□ -1.56
VCAN-207ENST00000507162 IFNA21P01568 189 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 IFNA17P01571 189 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 IGKV1D-12P01611 117 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 ZNF3P17036 446 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 ALOX5APP20292 161 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 GZMHP20718 246 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 ZNF134P52741 427 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 RIDAP52758 137 aaKnown RBP5.29□□□□□ -1.56
VCAN-207ENST00000507162 SF3A3Q12874 501 aaKnown RBP eCLIP5.29□□□□□ -1.56
VCAN-207ENST00000507162 PDZK1IP1Q13113 114 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 Q5VSD8 79 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 ZNF343Q6P1L6 599 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 Q6ZR54 194 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 SPATA12Q7Z6I5 190 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 TMEM61Q8N0U2 210 aa5.29□□□□□ -1.56
VCAN-207ENST00000507162 SYT8Q8NBV8 401 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms