RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 A0A1W2PPE3 182 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 C12orf77C9JDV5 145 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 AIPO00170 330 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 PEX14O75381 377 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 CA11O75493 328 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 GLAP06280 429 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 LPLP06858 475 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 FAM106CPP0CH98 169 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 MGMTP16455 207 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 GNG10P50151 68 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 GABPB1Q06547 395 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 GPR50Q13585 617 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 EBI3Q14213 229 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 SPHARQ15513 63 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 LTC4SQ16873 150 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 BEAN1Q3B7T3 259 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 NSUN5P1Q3KNT7 163 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 ACSM3Q53FZ2 586 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 FAM27D1Q5T7N8 215 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 RAB12Q6IQ22 244 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 FAM53AQ6NSI3 398 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 LRRTM1Q86UE6 522 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 C1QL4Q86Z23 238 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 DRAM1Q8N682 238 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 OR5AU1Q8NGC0 362 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 OR56B4Q8NH76 319 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 NEK7Q8TDX7 302 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 CAPSLQ8WWF8 208 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 PHYHIPQ92561 330 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 MYDGFQ969H8 173 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 ST6GALNAC6Q969X2 333 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 CYYR1Q96J86 154 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 BANF2Q9H503 90 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 DUSP21Q9H596 190 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 ETAA1Q9NY74 926 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 GHRLQ9UBU3 117 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 MOB4Q9Y3A3 225 aa7.21□□□□□ -1.26
PDLIM5-209ENST00000506632 IGHV1-3A0A0C4DH29 117 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 SH2D7A6NKC9 451 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 MCRIP1C9JLW8 97 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 PTGES3LE9PB15 166 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 G3V4G9 280 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 H0YHG0 523 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 SDCBPO00560 298 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 HSD17B6O14756 317 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 FGF16O43320 207 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 PDCD6O75340 191 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 CRTAPO75718 401 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 UCHL1P09936 223 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 FUT3P21217 361 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 MYF6P23409 242 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 VHLP40337 213 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 ZNF137PP52743 207 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 C21orf62-AS1Q17RA5 79 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 TMEM30BQ3MIR4 351 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 C1orf100Q5SVJ3 147 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 C6orf183Q5T699 404 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 SYT6Q5T7P8 510 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 SLC25A48Q6ZT89 311 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 ZNF554Q86TJ5 538 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 IZUMO1Q8IYV9 350 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 Q8N6K4 173 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 C5orf56Q8N8D9 126 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 OR4F17Q8NGA8 305 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 OR10X1Q8NGY0 326 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 UBALD1Q8TB05 177 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 CCDC107Q8WV48 283 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 R3HDM4Q96D70 268 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 OR4F4Q96R69 305 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 ANKRD60Q9BZ19 345 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 SELENOIQ9C0D9 397 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 MBNL3Q9NUK0 354 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 SCN3BQ9NY72 215 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 PEX16Q9Y5Y5 336 aa7.2□□□□□ -1.26
PDLIM5-209ENST00000506632 IGHV3-43A0A0B4J1X8 118 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 CCRL2O00421 344 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 SLC31A2O15432 143 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 SPINT2O43291 252 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 IGKV1D-33P01593 117 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 IGKV1-33P01594 117 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 HBZP02008 142 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 GAPDHP04406 335 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 UBBP0CG47 229 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 IGHV3-43DP0DP04 118 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 VSIG8P0DPA2 414 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 TMEM11P17152 192 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 RCC1P18754 421 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 CHATP28329 748 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 ZNF134P52741 427 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 QRFPP83859 136 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 TPBGQ13641 420 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 GLT8D1Q68CQ7 371 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 TRAT1Q6PIZ9 186 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 C10orf99Q6UWK7 81 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 TMEM91Q6ZNR0 172 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 CENPVQ7Z7K6 275 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 WFDC9Q8NEX5 89 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 OR4K15Q8NH41 348 aa7.19□□□□□ -1.26
PDLIM5-209ENST00000506632 OR1L1Q8NH94 360 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms