RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 GIPP09681 153 aaPredicted RBP4.53□□□□□ -1.68
MATR3-211ENST00000505625 TSPOP30536 169 aa4.53□□□□□ -1.68
MATR3-211ENST00000505625 MC5RP33032 325 aa4.53□□□□□ -1.68
MATR3-211ENST00000505625 SLC37A1P57057 533 aa4.53□□□□□ -1.68
MATR3-211ENST00000505625 RPS25P62851 125 aaKnown RBP4.53□□□□□ -1.68
MATR3-211ENST00000505625 OR4S2Q8NH73 311 aa4.53□□□□□ -1.68
MATR3-211ENST00000505625 MVB12AQ96EY5 273 aa4.53□□□□□ -1.68
MATR3-211ENST00000505625 GPR82Q96P67 336 aa4.53□□□□□ -1.68
MATR3-211ENST00000505625 RNF114Q9Y508 228 aa4.53□□□□□ -1.68
MATR3-211ENST00000505625 DOCK9Q9BZ29 2069 aa4.53□□□□□ -1.69
MATR3-211ENST00000505625 IGHV1-45A0A0A0MS14 117 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 F5H768 121 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 CST7O76096 145 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 IGLV3-27P01718 113 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZNF735P0CB33 412 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZNF620Q6ZNG0 422 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 STPG3Q8N7X2 389 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 DNASE2BQ8WZ79 361 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 MARS2Q96GW9 593 aaKnown RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZNF300Q96RE9 604 aaPredicted RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 RASL10BQ96S79 203 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 C2orf88Q9BSF0 95 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 GPR61Q9BZJ8 451 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 R4GMQ9 66 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ATP6V1G2-DDX39BF2Z307 99 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SMLR1H3BR10 107 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SLC25A20O43772 301 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 B4GALT3O60512 393 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 PAGE4O60829 102 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 HPXP02790 462 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 UBE2L3P68036 154 aaKnown RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZP4Q12836 540 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 CTF1Q16619 201 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SLC35E3Q7Z769 313 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 LRP11Q86VZ4 500 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SPSB4Q96A44 273 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 TMEM18Q96B42 140 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZNF488Q96MN9 340 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 LPAR3Q9UBY5 353 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 HEATR1Q9H583 2144 aaKnown RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 A0A087WUJ7 227 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 AQP8O94778 261 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 PRDX2P32119 198 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 CDKN2AP42771 156 aaKnown RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 EFNB2P52799 333 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 FAM53BQ14153 422 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 CD226Q15762 336 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZNF528Q3MIS6 628 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 CLEC7AQ9BXN2 247 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 PRELID1Q9Y255 219 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 INS-IGF2F8WCM5 200 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 PTTG1O95997 202 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 INSP01308 110 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 HMGA1P17096 107 aaKnown RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 PROX2Q3B8N5 592 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 CALHM1Q8IU99 346 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 TMEM251Q8N6I4 163 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 TBX15Q96SF7 602 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 TEAD3Q99594 435 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ASCL2Q99929 193 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ALKBH7Q9BT30 221 aaPredicted RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 GABARAPL3Q9BY60 117 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SBF1O95248 1867 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 MN1Q10571 1320 aaPredicted RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 MGMTP16455 207 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 IGFBP6P24592 240 aaPredicted RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 FXYD3Q14802 87 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 OR52I1Q8NGK6 324 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZNF48Q96MX3 618 aaPredicted RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 TEX101Q9BY14 249 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 PIPOXQ9P0Z9 390 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 HSF4Q9ULV5 492 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ASB4Q9Y574 426 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 TSC2P49815 1807 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 KIAA1324LA8MWY0 1029 aaPredicted RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 H3BTX0 84 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 FAM189A1O60320 539 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SIX6O95475 246 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 H2AFB1P0C5Y9 115 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 CCR6P51684 374 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 TMEM33P57088 247 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 ZNF826PQ6ZT77 177 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 POC1AQ8NBT0 407 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SLC35B2Q8TB61 432 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
MATR3-211ENST00000505625 ARPC1AQ92747 370 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 L3HYPDHQ96EM0 354 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 SH2D2AQ9NP31 389 aa4.52□□□□□ -1.69
MATR3-211ENST00000505625 LAMB1P07942 1786 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 TRAV21A0A0B4J279 112 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 COX5AP20674 150 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 NPPCP23582 126 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 ETV6P41212 452 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 RANP62826 216 aaKnown RBP4.51□□□□□ -1.69
MATR3-211ENST00000505625 PSG5Q15238 335 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 AFMIDQ63HM1 303 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 BRD3OSQ6XYD6 125 aa4.51□□□□□ -1.69
MATR3-211ENST00000505625 PCED1AQ9H1Q7 454 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms