RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 SRSF7Q16629 238 aaKnown RBP eCLIP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 DPPA3Q6W0C5 159 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 BEND4Q6ZU67 534 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 H1FOOQ8IZA3 346 aaPredicted RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 MRPL30Q8TCC3 161 aaKnown RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 REPIN1Q9BWE0 567 aaKnown RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 SDF2L1Q9HCN8 221 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 A0A096LPE4 126 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 TRAV39A0A0B4J263 110 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 A0A1W2PPZ6 126 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 LILRA1O75019 489 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 RNF224P0DH78 156 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF787Q6DD87 383 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 ABLIM2Q6H8Q1 611 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 AGBL5Q8NDL9 886 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 NEK7Q8TDX7 302 aa10.13□□□□□ -0.79
UBE3D-206ENST00000505226 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF552Q9H707 407 aaPredicted RBP10.13□□□□□ -0.79
UBE3D-206ENST00000505226 A0A1B0GV90 55 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 LRRC3CA6NJW4 275 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 HS3ST1O14792 307 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FGF5P12034 268 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 STX12Q86Y82 276 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 OR2V1Q8NHB1 315 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 MEGF10Q96KG7 1140 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 PRDM14Q9GZV8 571 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF576Q9H609 170 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 DEPPQ9NTK1 212 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 GFOD1Q9NXC2 390 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 ERRFI1Q9UJM3 462 aaPredicted RBP10.12□□□□□ -0.79
UBE3D-206ENST00000505226 DIDO1Q9BTC0 2240 aaKnown RBP10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A18PA6NE21 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A16PA6NEW6 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A20PA6NIJ5 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A8PA6NJQ4 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A7PA6NKC0 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A22PA8MWA6 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A12PA8MX19 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A5PA8MXJ8 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 B4DEV8 164 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 CLDN34H7C241 214 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 CYB5R3P00387 301 aaPredicted RBP10.12□□□□□ -0.79
UBE3D-206ENST00000505226 NGFP01138 241 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A15PP0C7V4 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A13PP0C7W8 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A14PP0C7W9 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 FAM90A24PP0C7X0 464 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 DMRTC2Q8IXT2 367 aaPredicted RBP10.12□□□□□ -0.79
UBE3D-206ENST00000505226 C1orf87Q8N0U7 546 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 ZNF525Q8N782 197 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 M1APQ8TC57 530 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 S100PBPQ96BU1 408 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 OR1A1Q9P1Q5 309 aa10.12□□□□□ -0.79
UBE3D-206ENST00000505226 ELOA3CA0A087WX78 387 aaPredicted RBP10.11□□□□□ -0.79
UBE3D-206ENST00000505226 PINLYPA6NC86 204 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 GJE1A6NN92 205 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 IGKV1-5P01602 117 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 SRD5A2P31213 254 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 Q0VFX4 171 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 HNF4GQ14541 408 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 OR8G1Q15617 311 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 RIPPLY2Q5TAB7 128 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 SLC25A24Q6NUK1 477 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 OR1K1Q8NGR3 316 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 MBD3L1Q8WWY6 194 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 RDH5Q92781 318 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 IL22RA2Q969J5 263 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
UBE3D-206ENST00000505226 TECTBQ96PL2 329 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 CACNG5Q9UF02 275 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 TRAV24A0A0B4J272 114 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 DNPH1O43598 174 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 IFNA5P01569 189 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 IL2RGP31785 369 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 PCBD1P61457 104 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 WDR25Q64LD2 544 aaPredicted RBP10.11□□□□□ -0.79
UBE3D-206ENST00000505226 OR4X1Q8NH49 305 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 RBKSQ9H477 322 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 CDH20Q9HBT6 801 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 OR2W1Q9Y3N9 320 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 C5orf49A4QMS7 147 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 TRAPPC6AO75865 159 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 DFFBO76075 338 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 CLN3Q13286 438 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 CEACAM21Q3KPI0 293 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 UBALD1Q8TB05 177 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 POM121Q96HA1 1249 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 PHF7Q9BWX1 381 aaPredicted RBP10.11□□□□□ -0.79
UBE3D-206ENST00000505226 ESPL1Q14674 2120 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 DOCK7Q96N67 2140 aa10.11□□□□□ -0.79
UBE3D-206ENST00000505226 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 KIR2DS1A0A191URI9 304 aa10.1□□□□□ -0.79
UBE3D-206ENST00000505226 K7ESF4 209 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms