RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 TMEM178BH3BS89 294 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 TNFRSF13BO14836 293 aaPredicted RBP11.09□□□□□ -0.63
LMNA-220ENST00000504687 SIGLEC5O15389 551 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 MPPED1O15442 326 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 CGB3P0DN86 165 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 CGB7P0DN87 165 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 RBMXP38159 391 aaKnown RBP11.09□□□□□ -0.63
LMNA-220ENST00000504687 P2RX3P56373 397 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 FXYD4P59646 89 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 AESQ08117 197 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 TMEM187Q14656 261 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 TMEM65Q6PI78 240 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 MUC15Q8N387 334 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 ZNF565Q8N9K5 539 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 UXS1Q8NBZ7 420 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 ZBTB34Q8NCN2 500 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 OR5T2Q8NGG2 359 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 CASTOR1Q8WTX7 329 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 LINC00574Q9H8X3 128 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 OR6C3Q9NZP0 311 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 CHD6Q8TD26 2715 aa11.09□□□□□ -0.63
LMNA-220ENST00000504687 IGKV1D-13A0A0B4J2D9 117 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 DUXBA0A1W2PPF3 345 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 ODAMA1E959 279 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 SMLR1H3BR10 107 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 C15orf65H3BRN8 121 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 F2RL2O00254 374 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 ITGB1BP1O14713 200 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 NDUFA2O43678 99 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 PLAUP00749 431 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 IGKV1-13P0DP09 117 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 SLC25A4P12235 298 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 S100GP29377 79 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 CD80P33681 288 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 GABRA2P47869 451 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 GLIPR1P48060 266 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 LUMP51884 338 aaPredicted RBP11.08□□□□□ -0.64
LMNA-220ENST00000504687 SNRPD2P62316 118 aaKnown RBP11.08□□□□□ -0.64
LMNA-220ENST00000504687 CCL8P80075 99 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 MRPS11P82912 194 aaKnown RBP11.08□□□□□ -0.64
LMNA-220ENST00000504687 IL15RAQ13261 267 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 ESCO2Q56NI9 601 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 CMTM1Q8IZ96 169 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 ASCC1Q8N9N2 400 aaKnown RBP11.08□□□□□ -0.64
LMNA-220ENST00000504687 OR10V1Q8NGI7 309 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 CORO2AQ92828 525 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 NEUROG1Q92886 237 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 IL22RA2Q969J5 263 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 C14orf79Q96F83 325 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 TMEM56Q96MV1 263 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 GAFA1Q96PS6 74 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 CHIAQ9BZP6 476 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 SLC5A7Q9GZV3 580 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 SLA2Q9H6Q3 261 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 TMEM106BQ9NUM4 274 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 KAAG1Q9UBP8 84 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 DSCAMO60469 2012 aa11.08□□□□□ -0.64
LMNA-220ENST00000504687 DSCAML1Q8TD84 2053 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 PPIAL4EA0A075B759 164 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 PPIAL4DF5H284 164 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 SPINT2O43291 252 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 ZG16O60844 167 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 SIX6O95475 246 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 CYB5R3P00387 301 aaPredicted RBP11.07□□□□□ -0.64
LMNA-220ENST00000504687 HBZP02008 142 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 PPIAL4FP0DN26 164 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 C4BPBP20851 252 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 UQCRFS1P47985 274 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 SLC9A3R2Q15599 337 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 DTX2Q86UW9 622 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 LGI3Q8N145 548 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 GLYATL2Q8WU03 294 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 MSI2Q96DH6 328 aaKnown RBP11.07□□□□□ -0.64
LMNA-220ENST00000504687 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 C2orf50Q96LR7 162 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 FAM212BQ9NTI7 297 aaPredicted RBP11.07□□□□□ -0.64
LMNA-220ENST00000504687 CBLN4Q9NTU7 201 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 RDH8Q9NYR8 311 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 JPT1Q9UK76 154 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 PPIAL4AQ9Y536 164 aa11.07□□□□□ -0.64
LMNA-220ENST00000504687 ARFGEF3Q5TH69 2177 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 RAI1Q7Z5J4 1906 aaPredicted RBP11.06□□□□□ -0.64
LMNA-220ENST00000504687 IGHV3OR15-7A0A075B7D8 119 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 C3orf85A0A1B0GTC6 90 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 NKX6-3A6NJ46 265 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 H0Y980 276 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 ZNF205O95201 554 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 LYL1P12980 280 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 RPA2P15927 270 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 UCP1P25874 307 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 IL2RGP31785 369 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 HOXA4Q00056 320 aaPredicted RBP11.06□□□□□ -0.64
LMNA-220ENST00000504687 IFITM2Q01629 132 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 MEF2CQ06413 473 aaPredicted RBP11.06□□□□□ -0.64
LMNA-220ENST00000504687 Q5BKY6 102 aa11.06□□□□□ -0.64
LMNA-220ENST00000504687 C11orf71Q6IPW1 123 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms