RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 FAM90A10PA6NDY2 464 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 FAM90A7PA6NKC0 464 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 SERPINE3A8MV23 424 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 FAM90A23PA8MXZ1 464 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 CASQ2O14958 399 aaPredicted RBP9.49□□□□□ -0.89
MED28-203ENST00000503945 FGF16O43320 207 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 CA11O75493 328 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 PF4P02776 101 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 ZNF816Q0VGE8 651 aaPredicted RBP9.49□□□□□ -0.89
MED28-203ENST00000503945 EBI3Q14213 229 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 Q3ZCU0 254 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 ACSM3Q53FZ2 586 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 KHDC1LQ5JSQ8 128 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 C6orf183Q5T699 404 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 STEAP3Q658P3 488 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 LAIR2Q6ISS4 152 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 TRAT1Q6PIZ9 186 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 OR2T10Q8NGZ9 312 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 CHPT1Q8WUD6 406 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 FBLIM1Q8WUP2 373 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 TFAP2CQ92754 450 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 DCLRE1BQ9H816 532 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 NECAP2Q9NVZ3 263 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 GFOD1Q9NXC2 390 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 SCN3BQ9NY72 215 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 GNG12Q9UBI6 72 aa9.49□□□□□ -0.89
MED28-203ENST00000503945 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 IGHV3-43A0A0B4J1X8 118 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 H0YHG0 523 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 HSD17B6O14756 317 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 IGHV3-43DP0DP04 118 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 MGMTP16455 207 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 CD1BP29016 333 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 REG1BP48304 166 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 SLC35B1P78383 322 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 RNLSQ5VYX0 342 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 ZNF329Q86UD4 541 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 FOXRED2Q8IWF2 684 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 PRR18Q8N4B5 295 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 NKAIN3Q8N8D7 197 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 OR4K15Q8NH41 348 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 UBALD1Q8TB05 177 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 EAF1Q96JC9 268 aaPredicted RBP9.48□□□□□ -0.89
MED28-203ENST00000503945 MND1Q9BWT6 205 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 GON7Q9BXV9 100 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 CST11Q9H112 138 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 OR2S2Q9NQN1 319 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 ZFP57Q9NU63 452 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 AURKAIP1Q9NWT8 199 aaPredicted RBP9.48□□□□□ -0.89
MED28-203ENST00000503945 RCC2Q9P258 522 aaKnown RBP9.48□□□□□ -0.89
MED28-203ENST00000503945 LRRC42Q9Y546 428 aa9.48□□□□□ -0.89
MED28-203ENST00000503945 KMT2CQ8NEZ4 4911 aaKnown RBP9.47□□□□□ -0.89
MED28-203ENST00000503945 IGHV3-72A0A0B4J1Y9 119 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 UBE2QL1A1L167 161 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 C12orf77C9JDV5 145 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 CDK1P06493 297 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 UBBP0CG47 229 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 IGLL1P15814 213 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 SRMP19623 302 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 VHLP40337 213 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 SLC35A2P78381 396 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 GPR50Q13585 617 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 SPHARQ15513 63 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 TMEM30BQ3MIR4 351 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 C6orf141Q5SZD1 244 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 GLT8D1Q68CQ7 371 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 C10orf99Q6UWK7 81 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 UNQ9370/PRO34162Q6UXP9 181 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 CEACAM19Q7Z692 300 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 SLC35E3Q7Z769 313 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 TGIF2LXQ8IUE1 241 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 COMMD1Q8N668 190 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 TMEM104Q8NE00 496 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 OR51D1Q8NGF3 324 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 RTN4IP1Q8WWV3 396 aaPredicted RBP9.47□□□□□ -0.89
MED28-203ENST00000503945 NEDD4LQ96PU5 975 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 RASL11BQ9BPW5 248 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 TAF9BQ9HBM6 251 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 FKBP14Q9NWM8 211 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
MED28-203ENST00000503945 TXNL1O43396 289 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 DUS4LO95620 317 aaKnown RBP9.46□□□□□ -0.9
MED28-203ENST00000503945 MOSP00540 346 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 IGHG2P01859 326 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 HBZP02008 142 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 RCC1P18754 421 aaPredicted RBP9.46□□□□□ -0.9
MED28-203ENST00000503945 ZNF134P52741 427 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 GABPB1Q06547 395 aaPredicted RBP9.46□□□□□ -0.9
MED28-203ENST00000503945 MED22Q15528 200 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 CT45A1Q5HYN5 189 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 FOXB2Q5VYV0 432 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 SLC25A48Q6ZT89 311 aaKnown RBP9.46□□□□□ -0.9
MED28-203ENST00000503945 LYPD6Q86Y78 171 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 GAPTQ8N292 157 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 OR8H1Q8NGG4 311 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 OR1L1Q8NH94 360 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 CT45A3Q8NHU0 189 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 ST6GALNAC6Q969X2 333 aa9.46□□□□□ -0.9
MED28-203ENST00000503945 FAM46BQ96A09 425 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms