RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MBNL3Q9NUK0 354 aaKnown RBP13.4□□□□□ -0.26
SCLT1-205ENST00000503401 FAM96BQ9Y3D0 163 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 ORC5O43913 435 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 HBZP02008 142 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 RORCP51449 518 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 HILS1P60008 231 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 MIDNQ504T8 468 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 DTX3Q8N9I9 347 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 TNFRSF19Q9NS68 423 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 SDCBPO00560 298 aaPredicted RBP13.39□□□□□ -0.27
SCLT1-205ENST00000503401 GNG10P50151 68 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 TMBIM6P55061 237 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 BAMBIQ13145 260 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 FOXB2Q5VYV0 432 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 IZUMO1Q8IYV9 350 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 SAMD12Q8N8I0 201 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 ZDHHC22Q8N966 263 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 C12orf4Q9NQ89 552 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 KCNIP1Q9NZI2 227 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 COMMD3Q9UBI1 195 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 CEPT1Q9Y6K0 416 aa13.39□□□□□ -0.27
SCLT1-205ENST00000503401 A0A087X0M5 115 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 SMIM31A0A1B0GVY4 71 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 A0A1B0GX30 115 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 A0A1W2PPE3 182 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 DNAJC9-AS1A6NH13 148 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 H3BMQ9 156 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 SPINT2O43291 252 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 HOXA3O43365 443 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-205ENST00000503401 TMEM127O75204 238 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 FBP1P09467 338 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 CD3GP09693 182 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 CD34P28906 385 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 LOXL3P58215 753 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 CDNFQ49AH0 187 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 PLA1AQ53H76 456 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 ZNF880Q6PDB4 577 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 Q6YL49 198 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 DYNAPQ8N1N2 210 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 OR10V1Q8NGI7 309 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 OR4P4Q8NGL7 312 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 PSG11Q9UQ72 335 aa13.38□□□□□ -0.27
SCLT1-205ENST00000503401 TMEM235A6NFC5 223 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 F2RL2O00254 374 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 TOR1AO14656 332 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 NOL3O60936 208 aaKnown RBP13.37□□□□□ -0.27
SCLT1-205ENST00000503401 MELTFP08582 738 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 MRPS15P82914 257 aaKnown RBP13.37□□□□□ -0.27
SCLT1-205ENST00000503401 ARFRP1Q13795 201 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 HMGN3Q15651 99 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 TRAT1Q6PIZ9 186 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 OR10A7Q8NGE5 316 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 MAFIPQ8WZ33 124 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 PHF21AQ96BD5 680 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 KCTD12Q96CX2 325 aaKnown RBP13.37□□□□□ -0.27
SCLT1-205ENST00000503401 RIMS4Q9H426 269 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-205ENST00000503401 PRDM13Q9H4Q3 707 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 GFOD1Q9NXC2 390 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 NDUFA13Q9P0J0 144 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 ZNF230Q9UIE0 474 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-205ENST00000503401 HILPDAQ9Y5L2 63 aa13.37□□□□□ -0.27
SCLT1-205ENST00000503401 TRAV18A0A075B6X5 111 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 TRBV6-6A0A0A6YYG2 114 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 CCDC160A6NGH7 325 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 SERPINE3A8MV23 424 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 IGLV1-47P01700 117 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 IGHV4-59P01825 116 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 GNMTQ14749 295 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 SLC9A3R2Q15599 337 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 SSX2Q16385 188 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 UBE2NLQ5JXB2 153 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 OR52L2PQ8NGH6 319 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 IL1F10Q8WWZ1 152 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 Q9N2K0 584 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 GNG12Q9UBI6 72 aa13.36□□□□□ -0.27
SCLT1-205ENST00000503401 J3QR06 171 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 SCGNO76038 276 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 EIF4EP06730 217 aaKnown RBP13.35□□□□□ -0.27
SCLT1-205ENST00000503401 FCGR3AP08637 254 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 PTHLHP12272 177 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 HLA-DRB5Q30154 266 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 ZNF260Q3ZCT1 412 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 MOB1BQ7L9L4 216 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 OR9G1Q8NH87 305 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 ZNF596Q8TC21 504 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 NUDCD2Q8WVJ2 157 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 BCL7BQ9BQE9 202 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 ABCG5Q9H222 651 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 OR2S2Q9NQN1 319 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 TBL2Q9Y4P3 447 aaKnown RBP13.35□□□□□ -0.27
SCLT1-205ENST00000503401 A0A0A6YYJ9 748 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 SLC31A2O15432 143 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 HPGDSO60760 199 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 SCTP09683 121 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 ZNF182P17025 639 aaPredicted RBP13.35□□□□□ -0.27
SCLT1-205ENST00000503401 HTR1DP28221 377 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 PRRX1P54821 245 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 HLA-DRB3P79483 266 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 HACD4Q5VWC8 232 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms