RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ATG5Q9H1Y0 275 aa20.37■□□□□ 0.85
LSM6-202ENST00000502781 TAF9BQ9HBM6 251 aa20.37■□□□□ 0.85
LSM6-202ENST00000502781 RHBDL2Q9NX52 303 aa20.37■□□□□ 0.85
LSM6-202ENST00000502781 SCOCQ9UIL1 159 aa20.37■□□□□ 0.85
LSM6-202ENST00000502781 NFYBP25208 207 aa20.36■□□□□ 0.85
LSM6-202ENST00000502781 UBA52P62987 128 aaKnown RBP20.36■□□□□ 0.85
LSM6-202ENST00000502781 SLC9A3R2Q15599 337 aa20.36■□□□□ 0.85
LSM6-202ENST00000502781 MINOS1Q5TGZ0 78 aa20.36■□□□□ 0.85
LSM6-202ENST00000502781 HDHD3Q9BSH5 251 aaPredicted RBP20.36■□□□□ 0.85
LSM6-202ENST00000502781 RAB9BQ9NP90 201 aa20.36■□□□□ 0.85
LSM6-202ENST00000502781 C12orf4Q9NQ89 552 aa20.36■□□□□ 0.85
LSM6-202ENST00000502781 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.36■□□□□ 0.85
LSM6-202ENST00000502781 MINOS1-NBL1R4GNA1 71 aa20.36■□□□□ 0.85
LSM6-202ENST00000502781 FAM172BPA6NC97 362 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 SPINT2O43291 252 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 SCGNO76038 276 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 HBZP02008 142 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 IER3P46695 156 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 DYNC1I2Q13409 638 aaKnown RBP20.35■□□□□ 0.85
LSM6-202ENST00000502781 TMEM30BQ3MIR4 351 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 MOB1BQ7L9L4 216 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 TMEM86BQ8N661 226 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 OR9G1Q8NH87 305 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 UBALD1Q8TB05 177 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 ZNF596Q8TC21 504 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 SSMEM1Q8WWF3 244 aa20.35■□□□□ 0.85
LSM6-202ENST00000502781 KCTD12Q96CX2 325 aaKnown RBP20.35■□□□□ 0.85
LSM6-202ENST00000502781 ZMAT3Q9HA38 289 aaKnown RBP20.35■□□□□ 0.85
LSM6-202ENST00000502781 SERPINE3A8MV23 424 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 HOXA3O43365 443 aaPredicted RBP20.34■□□□□ 0.85
LSM6-202ENST00000502781 ARL6IP1Q15041 203 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 HMGN3Q15651 99 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 HLA-DRB5Q30154 266 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 OR1L1Q8NH94 360 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 MALSU1Q96EH3 234 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 CMSS1Q9BQ75 279 aaKnown RBP20.34■□□□□ 0.85
LSM6-202ENST00000502781 BCL7BQ9BQE9 202 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 GFOD1Q9NXC2 390 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 KCNIP1Q9NZI2 227 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 PSG11Q9UQ72 335 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 POMT1Q9Y6A1 747 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 TRIM77I1YAP6 450 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 GNB3P16520 340 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 TMBIM6P55061 237 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 AANATQ16613 207 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 LTC4SQ16873 150 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 KRTAP24-1Q3LI83 254 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 Q3ZCU0 254 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 CLVS1Q8IUQ0 354 aaPredicted RBP20.34■□□□□ 0.85
LSM6-202ENST00000502781 DYNAPQ8N1N2 210 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 NDNFQ8TB73 568 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 DCSTAMPQ9H295 470 aa20.34■□□□□ 0.85
LSM6-202ENST00000502781 CHMP1AQ9HD42 196 aaPredicted RBP20.34■□□□□ 0.85
LSM6-202ENST00000502781 J3QR06 171 aa20.33■□□□□ 0.84
LSM6-202ENST00000502781 SDCBPO00560 298 aaPredicted RBP20.33■□□□□ 0.84
LSM6-202ENST00000502781 RNASE1P07998 156 aaKnown RBP20.33■□□□□ 0.84
LSM6-202ENST00000502781 HTR1DP28221 377 aa20.33■□□□□ 0.84
LSM6-202ENST00000502781 C8orf31Q8N9H6 132 aa20.33■□□□□ 0.84
LSM6-202ENST00000502781 RAB2BQ8WUD1 216 aa20.33■□□□□ 0.84
LSM6-202ENST00000502781 DUX5Q96PT3 197 aa20.33■□□□□ 0.84
LSM6-202ENST00000502781 ABCG5Q9H222 651 aa20.33■□□□□ 0.84
LSM6-202ENST00000502781 Q9N2K0 584 aa20.33■□□□□ 0.84
LSM6-202ENST00000502781 FBN1P35555 2871 aaKnown RBP20.32■□□□□ 0.84
LSM6-202ENST00000502781 COL6A5A8TX70 2615 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 IGHV4-59P01825 116 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 PRRX1P54821 245 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 CDNFQ49AH0 187 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 C5orf24Q7Z6I8 188 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 FAM216AQ8WUB2 273 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 LEAP2Q969E1 77 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 MMP28Q9H239 520 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 DPAGT1Q9H3H5 408 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 DPM3Q9P2X0 92 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 MGAT4AQ9UM21 535 aa20.32■□□□□ 0.84
LSM6-202ENST00000502781 A0A0A6YYH2 397 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 A6NJ64 397 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 VGLL3A8MV65 326 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 LY6LH3BQJ8 138 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 BUB1B-PAK6H3BSN5 160 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 TOR1AO14656 332 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 CD3GP09693 182 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 PAX6P26367 422 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 RORCP51449 518 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 HTD2P86397 168 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 FAM53AQ6NSI3 398 aaPredicted RBP20.31■□□□□ 0.84
LSM6-202ENST00000502781 PRR18Q8N4B5 295 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 CREB3L1Q96BA8 519 aa20.31■□□□□ 0.84
LSM6-202ENST00000502781 A0A075B6Q4 140 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 IGHV3-43A0A0B4J1X8 118 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 IGHV3-7P01780 117 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 GSTP1P09211 210 aaKnown RBP20.3■□□□□ 0.84
LSM6-202ENST00000502781 IGHV3-43DP0DP04 118 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 SSX2Q16385 188 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 ZNF260Q3ZCT1 412 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 LINC00311Q8N616 119 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 ZNF439Q8NDP4 499 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 TMEM158Q8WZ71 300 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 GALMQ96C23 342 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 JPT1Q9UK76 154 aa20.3■□□□□ 0.84
LSM6-202ENST00000502781 ELF5Q9UKW6 265 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms