RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 IGKV1D-33P01593 117 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 IGKV1-33P01594 117 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 GAPDHP04406 335 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 IGHV3-43DP0DP04 118 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 LOXL3P58215 753 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 ZNF816Q0VGE8 651 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 GPR50Q13585 617 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 ACSM3Q53FZ2 586 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 C6orf141Q5SZD1 244 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 C6orf183Q5T699 404 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 SYT6Q5T7P8 510 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 RNLSQ5VYX0 342 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 RAB12Q6IQ22 244 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 UNQ9370/PRO34162Q6UXP9 181 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 LYPD6Q86Y78 171 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 PRR18Q8N4B5 295 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 MS4A15Q8N5U1 240 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 LINC00311Q8N616 119 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 C8orf31Q8N9H6 132 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 TMEM104Q8NE00 496 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 OR4X2Q8NGF9 303 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 OR4K15Q8NH41 348 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 MYDGFQ969H8 173 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 Q96M66 194 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 GFOD1Q9NXC2 390 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 SCN3BQ9NY72 215 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 GHRLQ9UBU3 117 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 NKX1-2Q9UD57 310 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 TSSC4Q9Y5U2 329 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 PEX16Q9Y5Y5 336 aa6.74□□□□□ -1.33
HMGXB4-207ENST00000498212 IGHV1-3A0A0C4DH29 117 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 TCRBV4S1A1TA0A5B7 111 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 UBE2QL1A1L167 161 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 C12orf77C9JDV5 145 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 H0YHG0 523 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 FGF16O43320 207 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 CA11O75493 328 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 SC5DO75845 299 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 GLAP06280 429 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 PF4V1P10720 104 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 FUT3P21217 361 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 IL3RAP26951 378 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 VHLP40337 213 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 REG1BP48304 166 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 AQP4P55087 323 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 HNF4GQ14541 408 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 INSL4Q14641 139 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 SPHARQ15513 63 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 MED22Q15528 200 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 TMEM30BQ3MIR4 351 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 Q3ZCU0 254 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 OXLD1Q5BKU9 147 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 TCTEX1D4Q5JR98 221 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 RBM48Q5RL73 367 aaKnown RBP6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 KPRPQ5T749 579 aaPredicted RBP6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 FAM27D1Q5T7N8 215 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 GLT8D1Q68CQ7 371 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 FAM53AQ6NSI3 398 aaPredicted RBP6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 TRAT1Q6PIZ9 186 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 C10orf99Q6UWK7 81 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 MOB3BQ86TA1 216 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 C5orf56Q8N8D9 126 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 RTN4IP1Q8WWV3 396 aaPredicted RBP6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 FAM46BQ96A09 425 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 TMED9Q9BVK6 235 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 CST11Q9H112 138 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 GNG12Q9UBI6 72 aa6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 LSM2Q9Y333 95 aaKnown RBP6.73□□□□□ -1.33
HMGXB4-207ENST00000498212 IGHV3-72A0A0B4J1Y9 119 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 PSMB11A5LHX3 300 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 SLC31A2O15432 143 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 TXNL1O43396 289 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 PDCD6O75340 191 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 MPIG6BO95866 241 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 HBZP02008 142 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 PF4P02776 101 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 UBBP0CG47 229 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 RCC1P18754 421 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 CD33P20138 364 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 GP2P55259 537 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 SLC35A2P78381 396 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 EBI3Q14213 229 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 KHDC1LQ5JSQ8 128 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 SIGIRRQ6IA17 410 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 SLC25A48Q6ZT89 311 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 CEACAM19Q7Z692 300 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 LRRTM1Q86UE6 522 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 IZUMO1Q8IYV9 350 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 GAPTQ8N292 157 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 OR2T10Q8NGZ9 312 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 OR1L1Q8NH94 360 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 CHPT1Q8WUD6 406 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 NRG4Q8WWG1 115 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 PHYHIPQ92561 330 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 SGCDQ92629 289 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 UFD1Q92890 307 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 ST6GALNAC6Q969X2 333 aa6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 MBNL3Q9NUK0 354 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-207ENST00000498212 KCNIP1Q9NZI2 227 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms