RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 RASSF6Q6ZTQ3 369 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 H2AFVQ71UI9 128 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 COMMD7Q86VX2 200 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 DHFR2Q86XF0 187 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PRSS58Q8IYP2 241 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 PGAM4Q8N0Y7 254 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 GTPBP8Q8N3Z3 284 aaPredicted RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 TMEM104Q8NE00 496 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 C19orf18Q8NEA5 215 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 OR4A4PQ8NGN8 299 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 OR5J2Q8NH18 312 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 OR51A7Q8NH64 312 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 OR51E1Q8TCB6 317 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MITD1Q8WV92 249 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 ASB13Q8WXK3 278 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 C22orf15Q8WYQ4 148 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 SLC7A6Q92536 515 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 ZHX1-C8orf76Q96EF9 292 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 SMIM12Q96EX1 92 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MRPL48Q96GC5 212 aaKnown RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 GLT1D1Q96MS3 346 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 ERMAPQ96PL5 475 aaPredicted RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 CHP1Q99653 195 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 ZNF2Q9BSG1 426 aaPredicted RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 FRMD8P1Q9BZ68 369 aaPredicted RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 TM6SF2Q9BZW4 377 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MIXL1Q9H2W2 232 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 DSN1Q9H410 356 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 CACYBPQ9HB71 228 aaKnown RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 TREM1Q9NP99 234 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 TMEM138Q9NPI0 162 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 NIT2Q9NQR4 276 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 XPNPEP1Q9NQW7 623 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 NLE1Q9NVX2 485 aaPredicted RBP1.58□□□□□ -2.16
CBX3-208ENST00000497498 GPATCH2LQ9NWQ4 482 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 HRASLS2Q9NWW9 162 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 BABAM2Q9NXR7 383 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 USE1Q9NZ43 259 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 OPN4Q9UHM6 478 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 SSR3Q9UNL2 185 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 POMPQ9Y244 141 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 SPEF2Q9C093 1822 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MYH1P12882 1939 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 MYH2Q9UKX2 1941 aa1.58□□□□□ -2.16
CBX3-208ENST00000497498 DOCK9Q9BZ29 2069 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 NUP98P52948 1817 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 SPAG17Q6Q759 2223 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 A0A075B6Q4 140 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 IGHV5-51A0A0C4DH38 117 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 A0A1B0GV72 72 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TMEM218A2RU14 115 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CLDN24A6NM45 220 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 IQCF5A8MTL0 148 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 C5orf58C9J3I9 102 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 LRRN3E7EW58 273 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 AIPO00170 330 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 DFFAO00273 331 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 BHLHE40O14503 412 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TOX3O15405 576 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 TGOLN2O43493 480 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ORC5O43913 435 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 SC5DO75845 299 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 SLC25A14O95258 325 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 CTDNEP1O95476 244 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 FADS2O95864 444 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 BCHEP06276 602 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 DCNP07585 359 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 COX5BP10606 129 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ZNF14P17017 642 aaPredicted RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 BCKDHBP21953 392 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CPN2P22792 545 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 STOMP27105 288 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 S100A2P29034 98 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CASP1P29466 404 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ACTR1BP42025 376 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CDKN2CP42773 168 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 UQCRFS1P47985 274 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TGM4P49221 684 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 GNG10P50151 68 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 RAB9AP51151 201 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 SSR4P51571 173 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CCL23P55773 120 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 UBE2MP61081 183 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 PKIAP61925 76 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 RPS15P62841 145 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 FKBP1AP62942 108 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 MRPS10P82664 201 aaKnown RBP1.57□□□□□ -2.16
CBX3-208ENST00000497498 GTF2BQ00403 316 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 LIPEQ05469 1076 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 MERTKQ12866 999 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 TSPAN31Q12999 210 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 BTN1A1Q13410 526 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 NDUFAF6Q330K2 333 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 ZNF404Q494X3 552 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 NKAIN1Q4KMZ8 207 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 CDKL4Q5MAI5 379 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 HIST2H3PS2Q5TEC6 136 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 FKBP1CQ5VVH2 108 aa1.57□□□□□ -2.16
CBX3-208ENST00000497498 LPCAT4Q643R3 524 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms