RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 ZNF497Q6ZNH5 498 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 C18orf65Q6ZTR6 163 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 C8orf86Q6ZUL3 223 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 TGIF2LXQ8IUE1 241 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 IZUMO1Q8IYV9 350 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 STPG2Q8N412 459 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 OR2T10Q8NGZ9 312 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 NRG4Q8WWG1 115 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 TFAP2CQ92754 450 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 TMEM80Q96HE8 168 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 MCRIP2Q9BUT9 160 aaKnown RBP13.53□□□□□ -0.24
SMC4-226ENST00000497311 SPACA1Q9HBV2 294 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 MCRIP1C9JLW8 97 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 AP4M1O00189 453 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 MYCNOSP40205 109 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 Q3ZCU0 254 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 LAIR2Q6ISS4 152 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 Q8N6K4 173 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 KLHL30-AS1Q8NEE0 82 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 RTN4IP1Q8WWV3 396 aaPredicted RBP13.52□□□□□ -0.25
SMC4-226ENST00000497311 GGHQ92820 318 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 MRPS24Q96EL2 167 aaKnown RBP13.52□□□□□ -0.25
SMC4-226ENST00000497311 ABCG5Q9H222 651 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 RAB9BQ9NP90 201 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
SMC4-226ENST00000497311 TRAPPC2LQ9UL33 140 aa13.52□□□□□ -0.25
SMC4-226ENST00000497311 TRAV8-7A0A075B6U6 113 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 MAGEA13PA6NCF6 341 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 LINC01548A6NM66 108 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 SPINT2O43291 252 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 FSTP19883 344 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 CD1BP29016 333 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 RPS11P62280 158 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMC4-226ENST00000497311 VAX1Q5SQQ9 334 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 SYT6Q5T7P8 510 aaPredicted RBP13.51□□□□□ -0.25
SMC4-226ENST00000497311 FAM53AQ6NSI3 398 aaPredicted RBP13.51□□□□□ -0.25
SMC4-226ENST00000497311 TEX38Q6PEX7 206 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 GLIPR1L1Q6UWM5 242 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 ZNF695Q8IW36 515 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 JAGN1Q8N5M9 183 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 ZFP41Q8N8Y5 198 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 MUL1Q969V5 352 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 ST6GALNAC6Q969X2 333 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 P2RX4Q99571 388 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 GON7Q9BXV9 100 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 PLCXD1Q9NUJ7 323 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 ETAA1Q9NY74 926 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 CNOT2Q9NZN8 540 aaKnown RBP13.51□□□□□ -0.25
SMC4-226ENST00000497311 RCC2Q9P258 522 aaKnown RBP13.51□□□□□ -0.25
SMC4-226ENST00000497311 MRPS28Q9Y2Q9 187 aaKnown RBP13.51□□□□□ -0.25
SMC4-226ENST00000497311 DNAH9Q9NYC9 4486 aa13.51□□□□□ -0.25
SMC4-226ENST00000497311 A0A1W2PPK0 400 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 EFCAB10A6NFE3 127 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 C12orf77C9JDV5 145 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 TXNL1O43396 289 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 MOSP00540 346 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 GPR12P47775 334 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 ST3GAL4Q11206 333 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 PNLIPRP3Q17RR3 467 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 TMEM30BQ3MIR4 351 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 C6orf183Q5T699 404 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 SLC25A48Q6ZT89 311 aaKnown RBP13.5□□□□□ -0.25
SMC4-226ENST00000497311 Q8N9W7 124 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 TMEM104Q8NE00 496 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 PGLYRP3Q96LB9 341 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 OR14A2Q96R54 314 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 RASL11BQ9BPW5 248 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 GNG12Q9UBI6 72 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 PSORS1C1Q9UIG5 152 aa13.5□□□□□ -0.25
SMC4-226ENST00000497311 TRBV5-7A0A0A0MS05 114 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 H0YHG0 523 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 SLC31A2O15432 143 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 AQP4P55087 323 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 TAS2R43P59537 309 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 AWAT2Q6E213 333 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 RAB12Q6IQ22 244 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 TRAT1Q6PIZ9 186 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 UNQ9370/PRO34162Q6UXP9 181 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 CDH26Q8IXH8 852 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 PRR18Q8N4B5 295 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 ZNF485Q8NCK3 441 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 OR8H1Q8NGG4 311 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 OR4K15Q8NH41 348 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 S1PR3Q99500 378 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 PLSCR3Q9NRY6 295 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 PEX16Q9Y5Y5 336 aa13.49□□□□□ -0.25
SMC4-226ENST00000497311 PNMA8CA0A1B0GUJ8 204 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 RRP9O43818 475 aaKnown RBP13.48□□□□□ -0.25
SMC4-226ENST00000497311 HBZP02008 142 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 MAS1P04201 325 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 RPLP1P05386 114 aaKnown RBP13.48□□□□□ -0.25
SMC4-226ENST00000497311 ZNF137PP52743 207 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 GPR50Q13585 617 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 CXorf66Q5JRM2 361 aaPredicted RBP13.48□□□□□ -0.25
SMC4-226ENST00000497311 GAPTQ8N292 157 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 ZNF439Q8NDP4 499 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 BPIFB6Q8NFQ5 453 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 OR10V1Q8NGI7 309 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 SELENOIQ9C0D9 397 aa13.48□□□□□ -0.25
SMC4-226ENST00000497311 VCX3BQ9H321 246 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms