RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CTSEP14091 401 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 F8A1P23610 371 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 ZNHIT3Q15649 155 aaPredicted RBP1.95□□□□□ -2.1
SMC4-225ENST00000497203 CLEC12BQ2HXU8 276 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 C10orf91Q5T1B1 145 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 PDPK2PQ6A1A2 396 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 HCP5Q6MZN7 132 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 TMPPEQ6ZT21 453 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 HS3ST5Q8IZT8 346 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 Q8NAQ8 132 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 OR7G1Q8NGA0 311 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 OR5D18Q8NGL1 313 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 OR9I1Q8NGQ6 314 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 BBS2Q9BXC9 721 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 CHST5Q9GZS9 411 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 ALX4Q9H161 411 aaPredicted RBP1.95□□□□□ -2.1
SMC4-225ENST00000497203 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.95□□□□□ -2.1
SMC4-225ENST00000497203 PHLDA3Q9Y5J5 127 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 MYO5BQ9ULV0 1848 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 IGKV1D-37A0A075B6S9 117 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 F5H5T6 163 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 J3QLI3 93 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 NDUFS6O75380 124 aaKnown RBP1.94□□□□□ -2.1
SMC4-225ENST00000497203 OCMP0CE72 109 aaPredicted RBP1.94□□□□□ -2.1
SMC4-225ENST00000497203 PET100P0DJ07 73 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 RD3LP0DJH9 198 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 LGALS3P17931 250 aaKnown RBP1.94□□□□□ -2.1
SMC4-225ENST00000497203 GADD45AP24522 165 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 CRATP43155 626 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 DYNLL1P63167 89 aaKnown RBP1.94□□□□□ -2.1
SMC4-225ENST00000497203 MEF2BQ02080 365 aaPredicted RBP1.94□□□□□ -2.1
SMC4-225ENST00000497203 DMTNQ08495 405 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 CST6Q15828 149 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 CENPWQ5EE01 88 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 TIMM23BQ5SRD1 257 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 FAM45BPQ6NSW5 357 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 SPNS3Q6ZMD2 512 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 VN1R4Q7Z5H5 301 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 LYPD6Q86Y78 171 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 BOD1L2Q8IYS8 172 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 LFNGQ8NES3 379 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 OR11G2Q8NGC1 345 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 MUC7Q8TAX7 377 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 RAD51AP1Q96B01 352 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 TAMM41Q96BW9 452 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 POTEKPQ9BYX7 375 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 NRBP2Q9NSY0 501 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 SLC23A2Q9UGH3 650 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 LINC00588Q9Y4M8 146 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 LTBP4Q8N2S1 1624 aa1.94□□□□□ -2.1
SMC4-225ENST00000497203 PTPRKQ15262 1439 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 IGLV10-54A0A075B6I4 117 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 B4DEV8 164 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 E7EQL1 145 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 SMLR1H3BR10 107 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 PSMA1P25786 263 aaKnown RBP1.93□□□□□ -2.1
SMC4-225ENST00000497203 CRABP1P29762 137 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 AGTR1P30556 359 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 GABRA3P34903 492 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 GZMMP51124 257 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 PSMD7P51665 324 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 MAP3K7CLP57077 242 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 GABARAPL2P60520 117 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 APOFQ13790 326 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 MAPK14Q16539 360 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 SMARCD3Q6STE5 483 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 LRP11Q86VZ4 500 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 OR8K1Q8NGG5 319 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 OR52E4Q8NGH9 312 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 OR8B2Q96RD0 313 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 EBNA1BP2Q99848 306 aaKnown RBP1.93□□□□□ -2.1
SMC4-225ENST00000497203 SLC19A3Q9BZV2 496 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 METTL9Q9H1A3 318 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 METTL17Q9H7H0 456 aaPredicted RBP1.93□□□□□ -2.1
SMC4-225ENST00000497203 ZNF286AQ9HBT8 521 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 UBQLN4Q9NRR5 601 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 SCML1Q9UN30 329 aa1.93□□□□□ -2.1
SMC4-225ENST00000497203 CARHSP1Q9Y2V2 147 aaKnown RBP1.93□□□□□ -2.1
SMC4-225ENST00000497203 K7EQS6 105 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 M0QYV0 167 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 LECT2O14960 151 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 CETN3O15182 167 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 CDK14O94921 469 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 ORM1P02763 201 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 OR12D1P0DN82 309 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 PSMB6P28072 239 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 AKR1C2P52895 323 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 HES3Q5TGS1 186 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 EBLN2Q6P2I7 272 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 OR5L1Q8NGL2 311 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 STOML3Q8TAV4 291 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 RBP7Q96R05 134 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 DCUN1D5Q9BTE7 237 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 C11orf49Q9H6J7 331 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 WASHC3Q9Y3C0 194 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 FIS1Q9Y3D6 152 aa1.92□□□□□ -2.1
SMC4-225ENST00000497203 DNMT1P26358 1616 aaKnown RBP1.91□□□□□ -2.1
SMC4-225ENST00000497203 CEP170Q5SW79 1584 aa1.91□□□□□ -2.1
SMC4-225ENST00000497203 DAPL1A0PJW8 107 aa1.91□□□□□ -2.1
SMC4-225ENST00000497203 GOLGA6L10A6NI86 522 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms