RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 TMEM161BQ8NDZ6 487 aa3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 GPR32P1Q8NGA4 272 aa3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 APOBEC3DQ96AK3 386 aaPredicted RBP3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 OPTNQ96CV9 577 aa3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 CEP19Q96LK0 163 aa3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 VCX3BQ9H321 246 aa3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 TMEM38BQ9NVV0 291 aa3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 ATPIF1Q9UII2 106 aa3.56□□□□□ -1.84
SOX2-OT-216ENST00000497122 TNS2Q63HR2 1409 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 IGLV4-69A0A075B6H9 119 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 ISLRO14498 428 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 COPEO14579 308 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 CCNKO75909 580 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 CCNE2O96020 404 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 CD36P16671 472 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 MYL12AP19105 171 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 SULT1A1P50225 295 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 PFN3P60673 137 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 SNAP25P60880 206 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 RANP62826 216 aaKnown RBP3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 TSPAN31Q12999 210 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 MORN3Q6PF18 240 aaPredicted RBP3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 SLC35G3Q8N808 338 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 OR9I1Q8NGQ6 314 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 IMP4Q96G21 291 aaKnown RBP3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 REEP6Q96HR9 211 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 LINC00527Q9UJ94 153 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 TP53TG3Q9ULZ0 132 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 ARL2BPQ9Y2Y0 163 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 ZNF646O15015 1829 aaPredicted RBP3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 SIGLEC1Q9BZZ2 1709 aa3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 DNMT1P26358 1616 aaKnown RBP3.55□□□□□ -1.84
SOX2-OT-216ENST00000497122 MYO15BQ96JP2 1530 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 IGHV1-45A0A0A0MS14 117 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 ZNF207O43670 478 aaKnown RBP3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 CDRT1O95170 752 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 SERPINA1P01009 418 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 NRASP01111 189 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 HRASP01112 189 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 KRASP01116 189 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 ZNF708P17019 499 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 MPIP34949 423 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 GDI2P50395 445 aaKnown RBP3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 ERVS71-1P61550 626 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 DEFA6Q01524 100 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 ZNF678Q5SXM1 525 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 N4BP2L1Q5TBK1 243 aaPredicted RBP3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 Q6ZR03 302 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 HIST2H3AQ71DI3 136 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 ZNF101Q8IZC7 436 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 TMEM75Q8N9X5 138 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 OR8S1Q8NH09 359 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 SPPL2BQ8TCT7 592 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 RBPMSQ93062 196 aaKnown RBP3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 PRAP1Q96NZ9 151 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 EIF5A2Q9GZV4 153 aaKnown RBP3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 ZNF430Q9H8G1 570 aaPredicted RBP3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 VPS29Q9UBQ0 182 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 OPN4Q9UHM6 478 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 YTHDF2Q9Y5A9 579 aaKnown RBP3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 SLC22A7Q9Y694 548 aa3.54□□□□□ -1.84
SOX2-OT-216ENST00000497122 PCM1Q15154 2024 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 IGKV6D-41A0A0C4DH26 115 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 K7EPK0 472 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 CNIH1O95406 144 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 OR13C7P0DN81 318 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 OR12D1P0DN82 309 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 CTSEP14091 401 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 CDK9P50750 372 aaKnown RBP3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 SPCS3P61009 180 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 NAA20P61599 178 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 OR2F1Q13607 317 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 MAPK14Q16539 360 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 C2orf83Q53S99 150 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 MRPL2Q5T653 305 aaKnown RBP3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 ZFP2Q6ZN57 461 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 ITLN2Q8WWU7 325 aaPredicted RBP3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 EBNA1BP2Q99848 306 aaKnown RBP3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 TXNIPQ9H3M7 391 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 UBQLN4Q9NRR5 601 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 PRELID1Q9Y255 219 aa3.53□□□□□ -1.84
SOX2-OT-216ENST00000497122 AGRNO00468 2067 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 C5orf49A4QMS7 147 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 CLDN24A6NM45 220 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 TMEM250H0YL14 139 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 KPNA3O00505 521 aaPredicted RBP3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 CRYBA1P05813 215 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 LINC00869P0C866 280 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 AZU1P20160 251 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 G0S2P27469 103 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 PSMB3P49720 205 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 TMEM267Q0VDI3 215 aaPredicted RBP3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 TAF1AQ15573 450 aaPredicted RBP3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 HACD4Q5VWC8 232 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 TMEM215Q68D42 235 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 LCN8Q6JVE9 175 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 EBLN2Q6P2I7 272 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 NT5DC3Q86UY8 548 aa3.52□□□□□ -1.85
SOX2-OT-216ENST00000497122 NIT1Q86X76 327 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms