RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 GHRLQ9UBU3 117 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 PLXNB1O43157 2135 aa10.12□□□□□ -0.79
PTPRF-214ENST00000496043 IGHV3-43A0A0B4J1X8 118 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 IGHV1-3A0A0C4DH29 117 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 PSMB11A5LHX3 300 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 PTGES3LE9PB15 166 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 CRTAPO75718 401 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-214ENST00000496043 PF4P02776 101 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 PRB2P02812 416 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-214ENST00000496043 IGHV3-43DP0DP04 118 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 MGMTP16455 207 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 TMEM30BQ3MIR4 351 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 ACSM3Q53FZ2 586 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 C6orf183Q5T699 404 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 RNLSQ5VYX0 342 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 C10orf99Q6UWK7 81 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 UNQ9370/PRO34162Q6UXP9 181 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 LYPD6Q86Y78 171 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 MS4A15Q8N5U1 240 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 NKAIN3Q8N8D7 197 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 C5orf56Q8N8D9 126 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 OR2T10Q8NGZ9 312 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 OR4K15Q8NH41 348 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 UBALD1Q8TB05 177 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 CHPT1Q8WUD6 406 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 DCLRE1BQ9H816 532 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 FKBP14Q9NWM8 211 aa10.11□□□□□ -0.79
PTPRF-214ENST00000496043 UBE2QL1A1L167 161 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 NCBP2LA6PVI3 153 aaKnown RBP10.1□□□□□ -0.79
PTPRF-214ENST00000496043 SERPINE3A8MV23 424 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 C12orf77C9JDV5 145 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 H0YHG0 523 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 CDK1P06493 297 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 IGLL1P15814 213 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 CD1BP29016 333 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 REG1BP48304 166 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 C6orf141Q5SZD1 244 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 STEAP3Q658P3 488 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 GAPTQ8N292 157 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 TMEM104Q8NE00 496 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 EAF1Q96JC9 268 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-214ENST00000496043 MND1Q9BWT6 205 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 NECAP2Q9NVZ3 263 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 SCN3BQ9NY72 215 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 KCNIP1Q9NZI2 227 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 GNG12Q9UBI6 72 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 NOTCH3Q9UM47 2321 aa10.1□□□□□ -0.79
PTPRF-214ENST00000496043 IGHV3-72A0A0B4J1Y9 119 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 ANKRD65E5RJM6 399 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 SC5DO75845 299 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 IGHG2P01859 326 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 HBZP02008 142 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 UBBP0CG47 229 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 VHLP40337 213 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 SLC35B1P78383 322 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 GPR50Q13585 617 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 GLT8D1Q68CQ7 371 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
PTPRF-214ENST00000496043 SLC25A48Q6ZT89 311 aaKnown RBP10.09□□□□□ -0.79
PTPRF-214ENST00000496043 SLC35E3Q7Z769 313 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 ZNF329Q86UD4 541 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 FOXRED2Q8IWF2 684 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 PRR18Q8N4B5 295 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 OR1L1Q8NH94 360 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 RTN4IP1Q8WWV3 396 aaPredicted RBP10.09□□□□□ -0.79
PTPRF-214ENST00000496043 ST6GALNAC6Q969X2 333 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 PHF21AQ96BD5 680 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 Q96M66 194 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 CST11Q9H112 138 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 ZFP57Q9NU63 452 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 LRRC42Q9Y546 428 aa10.09□□□□□ -0.79
PTPRF-214ENST00000496043 TGP01266 2768 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 TXNL1O43396 289 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 PDCD6O75340 191 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 MOSP00540 346 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 RCC1P18754 421 aaPredicted RBP10.08□□□□□ -0.8
PTPRF-214ENST00000496043 SRMP19623 302 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 ZNF134P52741 427 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 SLC35A2P78381 396 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 SPHARQ15513 63 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 CT45A1Q5HYN5 189 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 FOXB2Q5VYV0 432 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 SIGIRRQ6IA17 410 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 CEACAM19Q7Z692 300 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 ZNF554Q86TJ5 538 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 TGIF2LXQ8IUE1 241 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 IZUMO1Q8IYV9 350 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 COMMD1Q8N668 190 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 OR10V1Q8NGI7 309 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 CT45A3Q8NHU0 189 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 RCC1LQ96I51 464 aaKnown RBP10.08□□□□□ -0.8
PTPRF-214ENST00000496043 NOL4LQ96MY1 436 aaPredicted RBP10.08□□□□□ -0.8
PTPRF-214ENST00000496043 NEDD4LQ96PU5 975 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 RASL11BQ9BPW5 248 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 TAF9BQ9HBM6 251 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 OR2S2Q9NQN1 319 aa10.08□□□□□ -0.8
PTPRF-214ENST00000496043 ERICH4A6NGS2 130 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms