RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RPS4Y2Q8TD47 263 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 TSEN15Q8WW01 171 aaKnown RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 PIGCQ92535 297 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 RGP1Q92546 391 aaPredicted RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 SMIM19Q96E16 107 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 ST6GAL2Q96JF0 529 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 PGLYRP3Q96LB9 341 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 FUNDC2Q9BWH2 189 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 NAA50Q9GZZ1 169 aaKnown RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 TUBG2Q9NRH3 451 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 SSR3Q9UNL2 185 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 NOTCH1P46531 2555 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 LOC107986453A0A1B0GWG9 222 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TRDV1A0A1B0GX56 115 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 FAM172BPA6NC97 362 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 CD300LBA8K4G0 201 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 ZNF879B4DU55 563 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 F5H5P2 479 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 GABRPO00591 440 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 MLNRO43193 412 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 MTRF1O75570 445 aaKnown RBP5.2□□□□□ -1.58
VIM-207ENST00000495528 CLPXO76031 633 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 SERPINA3P01011 423 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 SFTPBP07988 381 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 UBCP0CG48 685 aaKnown RBP5.2□□□□□ -1.58
VIM-207ENST00000495528 GABRA5P31644 462 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 PITPNBP48739 271 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 BPIFB3P59826 476 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 RIPPLY1Q0D2K3 151 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 PLA2G7Q13093 441 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TRAM1Q15629 374 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TAF9Q16594 264 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 ZNF404Q494X3 552 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 Q499Y3 187 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 YIF1BQ5BJH7 314 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 FAM27D1Q5T7N8 215 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 GPR157Q5UAW9 335 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 WDR25Q64LD2 544 aaPredicted RBP5.2□□□□□ -1.58
VIM-207ENST00000495528 C22orf42Q6IC83 251 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TMEM86BQ8N661 226 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 BHLHE23Q8NDY6 225 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 C19orf18Q8NEA5 215 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 OR8G5Q8NG78 346 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 OR8B3Q8NGG8 313 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 OR13G1Q8NGZ3 307 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 GPR148Q8TDV2 347 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 RPL3LQ92901 407 aaKnown RBP5.2□□□□□ -1.58
VIM-207ENST00000495528 ADAT3Q96EY9 351 aaPredicted RBP5.2□□□□□ -1.58
VIM-207ENST00000495528 UHRF2Q96PU4 802 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 OR8B2Q96RD0 313 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TBX15Q96SF7 602 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 SLC30A2Q9BRI3 323 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 PPIL3Q9H2H8 161 aaKnown RBP5.2□□□□□ -1.58
VIM-207ENST00000495528 SLA2Q9H6Q3 261 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 RNF167Q9H6Y7 350 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 MOB1AQ9H8S9 216 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TXNL4BQ9NX01 149 aaKnown RBP5.2□□□□□ -1.58
VIM-207ENST00000495528 NDUFB11Q9NX14 153 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 CLN8Q9UBY8 286 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 STUB1Q9UNE7 303 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 PIGLQ9Y2B2 252 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 GSTK1Q9Y2Q3 226 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 RHBDD3Q9Y3P4 386 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 V9GYS6 101 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TANC2Q9HCD6 1990 aa5.2□□□□□ -1.58
VIM-207ENST00000495528 TRBV5-5A0A0J9YX44 114 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 CENPVL3A0A0U1RRI6 287 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 ZNF850A8MQ14 1090 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 PIN1P1O15428 100 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 GPR137BO60478 399 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 GMDSO60547 372 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 GATBO75879 557 aaKnown RBP5.19□□□□□ -1.58
VIM-207ENST00000495528 DHRS3O75911 302 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 FSTL3O95633 263 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 IGKV3-20P01619 116 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 IGLV3-1P01715 115 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 IGHV4-59P01825 116 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 SRMP19623 302 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 CA6P23280 308 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 CFL1P23528 166 aaKnown RBP5.19□□□□□ -1.58
VIM-207ENST00000495528 ACKR3P25106 362 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 TGFBR1P36897 503 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 CFHR2P36980 270 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 SRP9P49458 86 aaKnown RBP5.19□□□□□ -1.58
VIM-207ENST00000495528 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
VIM-207ENST00000495528 VBP1P61758 197 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 GAGE5Q13069 117 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 GAGE6Q13070 117 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 MAB21L1Q13394 359 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 ZNF181Q2M3W8 571 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 FBXW12Q6X9E4 464 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 SERPINA12Q8IW75 414 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 CCDC54Q8NEL0 328 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 OR56B2PQ8NGI1 322 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 OR5D14Q8NGL3 314 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 DYRK2Q92630 601 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 TMEM106AQ96A25 262 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 DERL3Q96Q80 235 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 CENPOQ9BU64 300 aa5.19□□□□□ -1.58
VIM-207ENST00000495528 RGCCQ9H4X1 137 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms