RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 A0A087X0M5 115 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 IGHV2-26A0A0B4J1V2 119 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 A0A1B0GX30 115 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 A0A1W2PRD5 423 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 A0A1W2PRF3 423 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 A0A1W2PRM7 423 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 MEIOCA2RUB1 952 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 F2RL2O00254 374 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 SDCBPO00560 298 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-235ENST00000495515 TOR1AO14656 332 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 XRCC3O43542 346 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 HBZP02008 142 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 ARG1P05089 322 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 CD34P28906 385 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 PRRX1P54821 245 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 GNG2P59768 71 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 LTC4SQ16873 150 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 ZNF260Q3ZCT1 412 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 HACD4Q5VWC8 232 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 OLFML2AQ68BL7 652 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 ZNF626Q68DY1 528 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 ZNF880Q6PDB4 577 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 PRR18Q8N4B5 295 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 ZNF596Q8TC21 504 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 C22orf15Q8WYQ4 148 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 GALMQ96C23 342 aa13.95□□□□□ -0.18
HDAC6-235ENST00000495515 HDHD3Q9BSH5 251 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-235ENST00000495515 FAM25AB3EWG3 89 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 FAM25CB3EWG5 89 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 FAM25GB3EWG6 89 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 SAA4P35542 130 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 KIR2DS4P43632 304 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 KIR2DS1Q14954 304 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 HMGN3Q15651 99 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 TMEM69Q5SWH9 247 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 OR9G1Q8NH87 305 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 ZDHHC16Q969W1 377 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 CREB3L1Q96BA8 519 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 DGCR14Q96DF8 476 aaKnown RBP13.94□□□□□ -0.18
HDAC6-235ENST00000495515 CYYR1Q96J86 154 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 SLC6A7Q99884 636 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 Q9N2K0 584 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 GNG12Q9UBI6 72 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 ADAM30Q9UKF2 790 aa13.94□□□□□ -0.18
HDAC6-235ENST00000495515 TBL2Q9Y4P3 447 aaKnown RBP13.94□□□□□ -0.18
HDAC6-235ENST00000495515 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 TMEM235A6NFC5 223 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 RGS5O15539 181 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 HPGDSO60760 199 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 FCGR3AP08637 254 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 FBP1P09467 338 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 DTYMKP23919 212 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 GDNFP39905 211 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 HLA-DRB3P79483 266 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 HTD2P86397 168 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 Q3ZCU0 254 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 MINOS1Q5TGZ0 78 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 BCL6BQ8N143 479 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-235ENST00000495515 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 JMJD8Q96S16 334 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 AUNIPQ9H7T9 357 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 OR2S2Q9NQN1 319 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 GFOD1Q9NXC2 390 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 MINOS1-NBL1R4GNA1 71 aa13.93□□□□□ -0.18
HDAC6-235ENST00000495515 NIPBLQ6KC79 2804 aaeCLIP13.92□□□□□ -0.18
HDAC6-235ENST00000495515 ODF3BA8MYP8 253 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 TRDCB7Z8K6 153 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 RGS11O94810 467 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 EIF4EP06730 217 aaKnown RBP13.92□□□□□ -0.18
HDAC6-235ENST00000495515 MELTFP08582 738 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 HTR1DP28221 377 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 SRSF7Q16629 238 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC6-235ENST00000495515 STEAP3Q658P3 488 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 BEND2Q8NDZ0 799 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 UBALD1Q8TB05 177 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 IL1F10Q8WWZ1 152 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 ZNF286AQ9HBT8 521 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 JPT1Q9UK76 154 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 AMMECR1Q9Y4X0 333 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-235ENST00000495515 DSCAML1Q8TD84 2053 aa13.92□□□□□ -0.18
HDAC6-235ENST00000495515 A0A0U1RQK1 487 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 DPPA5A6NC42 116 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 FAM172BPA6NC97 362 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 TCF21O43680 179 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 ELK1P19419 428 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 CEACAM3P40198 252 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 CBX5P45973 191 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 LOXL3P58215 753 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 TAS2R20P59543 309 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 DEFB112Q30KQ8 113 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 BAIAP2L2Q6UXY1 529 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 IZUMO1Q8IYV9 350 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 C8orf31Q8N9H6 132 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 MCFD2Q8NI22 146 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 C15orf40Q8WUR7 153 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 NUDCD2Q8WVJ2 157 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 C6orf62Q9GZU0 229 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-235ENST00000495515 PSG11Q9UQ72 335 aa13.91□□□□□ -0.18
HDAC6-235ENST00000495515 IGHV3-43A0A0B4J1X8 118 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms