RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	C22orf46	C9J442	243 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	F2RL2	O00254	374 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	HSPA12A	O43301	675 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	RAB3D	O95716	219 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	HBZ	P02008	142 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	ZBTB25	P24278	435 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	ERVFRD-1	P60508	538 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	LCN2	P80188	198 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	ZNF273	Q14593	569 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	BAK1	Q16611	211 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	METTL11B	Q5VVY1	283 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	MZT2B	Q6NZ67	158 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	TCF23	Q7RTU1	214 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	GLCCI1	Q86VQ1	547 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	TEX29	Q8N6K0	151 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	OR10J5	Q8NHC4	309 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	EDARADD	Q8WWZ3	215 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	SNAPC3	Q92966	411 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	PRRT1	Q99946	306 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	GINS4	Q9BRT9	223 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	ABCB10	Q9NRK6	738 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	IDI2-AS1	Q9NZ38	188 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	SLC23A1	Q9UHI7	598 aa		11.17	□□□□□ -0.62
APTX-231	ENST00000494973	C17orf98	A8MV24	154 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	FAM157A	C9JC47	383 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	C15orf65	H3BRN8	121 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973		J3QLI3	93 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973		J3QRK9	145 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	FCN3	O75636	299 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	CGB3	P0DN86	165 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	CGB7	P0DN87	165 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	HLA-DMA	P28067	261 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	SSTR5	P35346	364 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	HRH1	P35367	487 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	ECI1	P42126	302 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	KLF9	Q13886	244 aa	Predicted RBP	11.16	□□□□□ -0.62
APTX-231	ENST00000494973	TMEM249	Q2WGJ8	235 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	LY6G6F	Q5SQ64	297 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	NCR3LG1	Q68D85	454 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	FGFRL1	Q8N441	504 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	PRR18	Q8N4B5	295 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	WFDC11	Q8NEX6	87 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	IL1F10	Q8WWZ1	152 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	KIRREL1	Q96J84	757 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	METTL8	Q9H825	291 aa	Known RBP	11.16	□□□□□ -0.62
APTX-231	ENST00000494973	EHF	Q9NZC4	300 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	ONECUT1	Q9UBC0	465 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	GNG12	Q9UBI6	72 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	SCP2D1	Q9UJQ7	156 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	SESN1	Q9Y6P5	492 aa		11.16	□□□□□ -0.62
APTX-231	ENST00000494973	FLNB	O75369	2602 aa	Known RBP	11.16	□□□□□ -0.62
APTX-231	ENST00000494973	NOTCH2	Q04721	2471 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	TRBV6-7	A0A0A0MS04	114 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	SDCBP	O00560	298 aa	Predicted RBP	11.15	□□□□□ -0.62
APTX-231	ENST00000494973	ITGB1BP1	O14713	200 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	CD3D	P04234	171 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	SCT	P09683	121 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	GSTT2	P0CG29	244 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	OR5H8	P0DN80	308 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	ZFP36	P26651	326 aa	Known RBP	11.15	□□□□□ -0.62
APTX-231	ENST00000494973	DVL1P1	P54792	670 aa	Predicted RBP	11.15	□□□□□ -0.62
APTX-231	ENST00000494973	TSPAN5	P62079	268 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	C17orf58	Q2M2W7	97 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	DCAF12L2	Q5VW00	463 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973		Q6ZPA2	131 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	OVCH2	Q7RTZ1	564 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	MAFIP	Q8WZ33	124 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	TNFRSF14	Q92956	283 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	DACT3	Q96B18	629 aa	Predicted RBP	11.15	□□□□□ -0.62
APTX-231	ENST00000494973	TMEM186	Q96B77	213 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	TOLLIP	Q9H0E2	274 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	GHITM	Q9H3K2	345 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	UNKL	Q9H9P5	680 aa	Known RBP	11.15	□□□□□ -0.62
APTX-231	ENST00000494973	OR2S2	Q9NQN1	319 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	ZNF69	Q9UC07	566 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	ITGB1BP2	Q9UKP3	347 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973	INSIG2	Q9Y5U4	225 aa		11.15	□□□□□ -0.62
APTX-231	ENST00000494973		A0A087X0M5	115 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	TRAV39	A0A0B4J263	110 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973		A0A1B0GX30	115 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	BET1	O15155	118 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	YPEL1	O60688	119 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	AMY2A	P04746	511 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	FCER2	P06734	321 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	IGHV1-8	P0DP01	117 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	CCL3L1	P16619	93 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	RAB7A	P51149	207 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	DLX6	P56179	175 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	HERV-K104	P61576	105 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	PAX2	Q02962	417 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	ASAH1	Q13510	395 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	CYB5R2	Q6BCY4	276 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	LYSMD2	Q8IV50	215 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	C8orf31	Q8N9H6	132 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	OR4C16	Q8NGL9	310 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	OR13D1	Q8NGV5	346 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	OR6F1	Q8NGZ6	308 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	OR1L1	Q8NH94	360 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	SCGB3A2	Q96PL1	93 aa		11.14	□□□□□ -0.63
APTX-231	ENST00000494973	YPEL2	Q96QA6	119 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms