RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 AIPO00170 330 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 CCRL2O00421 344 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 IGHG2P01859 326 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 MAS1P04201 325 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 RCC1P18754 421 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-208ENST00000494728 GP2P55259 537 aaKnown RBP9.17□□□□□ -0.94
VTI1A-208ENST00000494728 SLC35A2P78381 396 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 GNMTQ14749 295 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 GLIPR1L1Q6UWM5 242 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 SLC16A12Q6ZSM3 486 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 AHSA2Q719I0 299 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 MOB3BQ86TA1 216 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 LINC00596Q86U02 117 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 GAPTQ8N292 157 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 JAGN1Q8N5M9 183 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 LINC00311Q8N616 119 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 Q8N9W7 124 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 OR4K15Q8NH41 348 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 OR1L1Q8NH94 360 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 RTN4IP1Q8WWV3 396 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-208ENST00000494728 KCNK15Q9H427 330 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 PLSCR3Q9NRY6 295 aa9.17□□□□□ -0.94
VTI1A-208ENST00000494728 IRGMA1A4Y4 181 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 SERPINE3A8MV23 424 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 H3BUI4 141 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 ORC5O43913 435 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 HBZP02008 142 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 GTF2F2P13984 249 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 GPR12P47775 334 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 THBS3P49746 956 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 DEFB136Q30KP8 78 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 CT45A1Q5HYN5 189 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 FAM27D1Q5T7N8 215 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 SYT6Q5T7P8 510 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-208ENST00000494728 TTC23Q5W5X9 447 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 AWAT2Q6E213 333 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 RAB12Q6IQ22 244 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 C11orf87Q6NUJ2 197 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 SLC25A48Q6ZT89 311 aaKnown RBP9.16□□□□□ -0.94
VTI1A-208ENST00000494728 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 STPG2Q8N412 459 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 DHRSXQ8N5I4 330 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 OR52M1Q8NGK5 317 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 CT45A3Q8NHU0 189 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 FBLIM1Q8WUP2 373 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 RCC1LQ96I51 464 aaKnown RBP9.16□□□□□ -0.94
VTI1A-208ENST00000494728 Q96M66 194 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 HSPB9Q9BQS6 159 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 PSORS1C1Q9UIG5 152 aa9.16□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF780AO75290 641 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-208ENST00000494728 SC5DO75845 299 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 GAPDHP04406 335 aaKnown RBP9.15□□□□□ -0.94
VTI1A-208ENST00000494728 MGMTP16455 207 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 CELP19835 753 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 GZMHP20718 246 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 ZNF137PP52743 207 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 F2RL1P55085 397 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 EGFEM1PQ0D2K5 195 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 TGIF2LXQ8IUE1 241 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 PRR18Q8N4B5 295 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 PACRGLQ8N7B6 248 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 C8orf31Q8N9H6 132 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 SETD9Q8NE22 299 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 KLHL30-AS1Q8NEE0 82 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 MRPL30Q8TCC3 161 aaKnown RBP9.15□□□□□ -0.94
VTI1A-208ENST00000494728 CHPT1Q8WUD6 406 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 FAM46BQ96A09 425 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 P2RX4Q99571 388 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 S100A13Q99584 98 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 SELENOIQ9C0D9 397 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 FKBP14Q9NWM8 211 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 PAK1IP1Q9NWT1 392 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-208ENST00000494728 ETAA1Q9NY74 926 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 CKLFQ9UBR5 152 aa9.15□□□□□ -0.94
VTI1A-208ENST00000494728 UBE2QL1A1L167 161 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 EFCAB10A6NFE3 127 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 NCBP2LA6PVI3 153 aaKnown RBP9.14□□□□□ -0.95
VTI1A-208ENST00000494728 CRTAPO75718 401 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-208ENST00000494728 RPLP1P05386 114 aaKnown RBP9.14□□□□□ -0.95
VTI1A-208ENST00000494728 CAPGP40121 348 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 WNT4P56705 351 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 CFHR3Q02985 330 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 C6orf141Q5SZD1 244 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 OGFRL1Q5TC84 451 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-208ENST00000494728 OR10K2Q6IF99 312 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 FAM71E2Q8N5Q1 922 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 TFAP2CQ92754 450 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 RAX2Q96IS3 184 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 RITA1Q96K30 269 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 ABCG5Q9H222 651 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 LIN7CQ9NUP9 197 aaKnown RBP9.14□□□□□ -0.95
VTI1A-208ENST00000494728 CNOT2Q9NZN8 540 aaKnown RBP9.14□□□□□ -0.95
VTI1A-208ENST00000494728 TRAPPC2LQ9UL33 140 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 PEX16Q9Y5Y5 336 aa9.14□□□□□ -0.95
VTI1A-208ENST00000494728 NUDT19A8MXV4 375 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 MCRIP1C9JLW8 97 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 ANKRD65E5RJM6 399 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 MYL12BO14950 172 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 CASQ2O14958 399 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-208ENST00000494728 CNTFRP26992 372 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms