RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 RPL13AP40429 203 aaKnown RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 OPRD1P41143 372 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ELK3P41970 407 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 NSG1P42857 185 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 NKX2-1P43699 371 aaPredicted RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ZFP36L2P47974 494 aaKnown RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 AQP5P55064 265 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 BACE1P56817 501 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 TAS2R20P59543 309 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 RPL27P61353 136 aaKnown RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 RPS25P62851 125 aaKnown RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 FKBP1BP68106 108 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 SRPXP78539 464 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 PPP1R1AQ13522 171 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 GINS1Q14691 196 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF74Q16587 644 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 TMEM236Q5W0B7 351 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 TMEM215Q68D42 235 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 XAF1Q6GPH4 301 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 RTL6Q6ICC9 239 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 C12orf54Q6X4T0 127 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 Q6ZSR3 168 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 NEGR1Q7Z3B1 354 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 GKN2Q86XP6 184 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ABHD12Q8N2K0 398 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 CLDN19Q8N6F1 224 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 EID2Q8N6I1 236 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 C5orf17Q8NAS9 161 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 OR4K1Q8NGD4 311 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 DOK4Q8TEW6 326 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 NEIL2Q969S2 332 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 MRPL53Q96EL3 112 aaKnown RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 DIRAS2Q96HU8 199 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ADTRPQ96IZ2 230 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 DEFB118Q96PH6 123 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 OR6C1Q96RD1 312 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF300Q96RE9 604 aaPredicted RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 SELENOIQ9C0D9 397 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 OR51I2Q9H344 312 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 CWH43Q9H720 699 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 MOB1AQ9H8S9 216 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 TBC1D17Q9HA65 648 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 NMRAL1Q9HBL8 299 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF71Q9NQZ8 489 aaPredicted RBP3.79□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF586Q9NXT0 402 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 MUTYHQ9UIF7 546 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 NCKAP5O14513 1909 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 LOXHD1Q8IVV2 1947 aa3.79□□□□□ -1.8
CCDC66-222ENST00000494672 TRIP11Q15643 1979 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 CCDC88AQ3V6T2 1871 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 FRMPD1Q5SYB0 1578 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 UGGT1Q9NYU2 1555 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 LOC102724200A0A096LPH7 203 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 NSG1A0A0A6YYJ2 146 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 LOC100130705A0A1B0GUX0 176 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 OR2M5A3KFT3 312 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 C7orf66A4D0T2 115 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 LRRC30A6NM36 301 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF705GA8MUZ8 300 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 K7EPK0 472 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 SYNGR1O43759 233 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 MPDU1O75352 247 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 CLDN1O95832 211 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 MOSP00540 346 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 NGFP01138 241 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 CSN3P07498 182 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 SP9P0CG40 484 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 AOC1P19801 751 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 PSMB1P20618 241 aaKnown RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 SRIP30626 198 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 GABRA3P34903 492 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 HRH1P35367 487 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 OR1D4P47884 311 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 TFPI2P48307 235 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 CSRP3P50461 194 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 SGSHP51688 502 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 EMP1P54849 157 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 XGP55808 180 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF121P58317 390 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 UBA52P62987 128 aaKnown RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 OC90Q02509 493 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 SIX1Q15475 284 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 BATFQ16520 125 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 HLA-DRB5Q30154 266 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 TEX36Q5VZQ5 186 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 SPINK14Q6IE38 97 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 TRIM40Q6P9F5 258 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF534Q76KX8 674 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 LRRTM1Q86UE6 522 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 C20orf196Q8IYI0 205 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 FAM71E2Q8N5Q1 922 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 MDS2Q8NDY4 140 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 OR5A1Q8NGJ0 315 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 OR4C13Q8NGP0 309 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 OR1S2Q8NGQ3 325 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 OR1L8Q8NGR8 309 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 PLPPR1Q8TBJ4 325 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 C15orf40Q8WUR7 153 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 BLNKQ8WV28 456 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms