RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ABHD14AQ9BUJ0 271 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 GLRX2Q9NS18 164 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 STRAPQ9Y3F4 350 aaKnown RBP9.51□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF175Q9Y473 711 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 AGFG2O95081 481 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 NXPH2O95156 264 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF16P17020 682 aaPredicted RBP9.5□□□□□ -0.89
CHMP3-209ENST00000494623 RAB5CP51148 216 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 FLI1Q01543 452 aaPredicted RBP9.5□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF266Q14584 549 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 LURAP1LQ8IV03 231 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 OR10V1Q8NGI7 309 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 RNASE11Q8TAA1 199 aaKnown RBP9.5□□□□□ -0.89
CHMP3-209ENST00000494623 GPR146Q96CH1 333 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 FBXO7Q9Y3I1 522 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 DUXBA0A1W2PPF3 345 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 LRP5LA4QPB2 252 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 PPP1CCP36873 323 aaKnown RBP9.5□□□□□ -0.89
CHMP3-209ENST00000494623 UCP2P55851 309 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 PSG7Q13046 419 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF154Q13106 437 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 ODF3L1Q8IXM7 274 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 TAAR3PQ9P1P4 343 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 OR14J1Q9UGF5 321 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 KPTNQ9Y664 436 aa9.5□□□□□ -0.89
CHMP3-209ENST00000494623 CLEC18AA5D8T8 446 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 PCP4L1A6NKN8 68 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 H3BP45 60 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 GPR37O15354 613 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 PITX3O75364 302 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 CXorf67Q86X51 503 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-209ENST00000494623 CLEC18CQ8NCF0 446 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 SCRT1Q9BWW7 348 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 IFT22Q9H7X7 185 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 RPS10P5Q9NQ39 176 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 TINAGQ9UJW2 476 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 KCNS2Q9ULS6 477 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 POLDIP2Q9Y2S7 368 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 ASPMQ8IZT6 3477 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 SPAARA0A1B0GVQ0 90 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 CDRT15L2A8MXV6 281 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 SNRNP70P08621 437 aaKnown RBP9.49□□□□□ -0.89
CHMP3-209ENST00000494623 CEBPDP49716 269 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-209ENST00000494623 HOXA4Q00056 320 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-209ENST00000494623 TESK1Q15569 626 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 OR8G1Q15617 311 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 GABRA6Q16445 453 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 COMMD1Q8N668 190 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 DEFB124Q8NES8 71 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 RXFP4Q8TDU9 374 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 IL22RA2Q969J5 263 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 CABLES2Q9BTV7 478 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 C20orf24Q9BUV8 137 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 OBP2BQ9NPH6 170 aa9.49□□□□□ -0.89
CHMP3-209ENST00000494623 K7N7A8 449 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 SH2D1BO14796 132 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 CRYBA1P05813 215 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 MPV17P39210 176 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 CEACAM6P40199 344 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 PAX9P55771 341 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 ERVK11-1P61568 191 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 CCL20P78556 96 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF497Q6ZNH5 498 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 Q6ZRM9 215 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 FAM214BQ7L5A3 538 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 M0R036 132 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 CNOT4O95628 575 aaKnown RBP9.48□□□□□ -0.89
CHMP3-209ENST00000494623 IGLV2-14P01704 120 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 OR13C7P0DN81 318 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 RAC2P15153 192 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 MDH2P40926 338 aaKnown RBP9.48□□□□□ -0.89
CHMP3-209ENST00000494623 RUNX1Q01196 453 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 Q8IYB0 196 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 KLF14Q8TD94 323 aaPredicted RBP9.48□□□□□ -0.89
CHMP3-209ENST00000494623 ABHD14BQ96IU4 210 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 CLCC1Q96S66 551 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 RARRES2Q99969 163 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 BCL2L14Q9BZR8 327 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 CLCF1Q9UBD9 225 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
CHMP3-209ENST00000494623 MEX3AA1L020 520 aaKnown RBP9.47□□□□□ -0.89
CHMP3-209ENST00000494623 WDR1O75083 606 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 PGA5P0DJD9 388 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 HMGN3Q15651 99 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 ZFP82Q8N141 532 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 CD300LFQ8TDQ1 290 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 PBDC1Q9BVG4 233 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 SMCO4Q9NRQ5 59 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 FZR1Q9UM11 496 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 PRELID3BQ9Y3B1 194 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 WNT9BO14905 357 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 IGKV1-39P01597 117 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 IGKV1D-39P04432 117 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 HEXAP06865 529 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 MMP9P14780 707 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 DAOP14920 347 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 WT1P19544 449 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-209ENST00000494623 VWA1Q6PCB0 445 aa9.47□□□□□ -0.89
CHMP3-209ENST00000494623 INO80CQ6PI98 192 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms