RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PARP12Q9H0J9 701 aaKnown RBP13.85□□□□□ -0.19
ATG4B-225ENST00000494465 GCM1Q9NP62 436 aa13.85□□□□□ -0.19
ATG4B-225ENST00000494465 MAB21L2Q9Y586 359 aa13.85□□□□□ -0.19
ATG4B-225ENST00000494465 C12orf77C9JDV5 145 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 IFNA21P01568 189 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 ASCL1P50553 236 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 BEX5Q5H9J7 111 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 BOLLQ8N9W6 283 aaKnown RBP13.84□□□□□ -0.19
ATG4B-225ENST00000494465 BVESQ8NE79 360 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 DCUN1D4Q92564 292 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 ZDHHC8Q9ULC8 765 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 ROS1P08922 2347 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 ITPR1Q14643 2758 aa13.84□□□□□ -0.19
ATG4B-225ENST00000494465 IGHV3OR15-7A0A075B7D8 119 aa13.83□□□□□ -0.19
ATG4B-225ENST00000494465 OR4A8P0C604 315 aa13.83□□□□□ -0.19
ATG4B-225ENST00000494465 GLIPR1P48060 266 aa13.83□□□□□ -0.19
ATG4B-225ENST00000494465 TNFAIP6P98066 277 aaPredicted RBP13.83□□□□□ -0.19
ATG4B-225ENST00000494465 ADAM5Q6NVV9 412 aa13.83□□□□□ -0.19
ATG4B-225ENST00000494465 OR10V1Q8NGI7 309 aa13.83□□□□□ -0.19
ATG4B-225ENST00000494465 OR1L1Q8NH94 360 aa13.83□□□□□ -0.19
ATG4B-225ENST00000494465 DYSFO75923 2080 aa13.83□□□□□ -0.2
ATG4B-225ENST00000494465 PGLYRP1O75594 196 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-225ENST00000494465 KRBOX4Q5JUW0 171 aa13.83□□□□□ -0.2
ATG4B-225ENST00000494465 SLC51BQ86UW2 128 aa13.83□□□□□ -0.2
ATG4B-225ENST00000494465 TPRX1Q8N7U7 411 aa13.83□□□□□ -0.2
ATG4B-225ENST00000494465 SLC35G3Q8N808 338 aa13.83□□□□□ -0.2
ATG4B-225ENST00000494465 TMEM56Q96MV1 263 aa13.83□□□□□ -0.2
ATG4B-225ENST00000494465 TMEM56-RWDD3S4R434 201 aa13.83□□□□□ -0.2
ATG4B-225ENST00000494465 OOEPA6NGQ2 149 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 CCL21O00585 134 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 B3GALNT1O75752 331 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 GABRA2P47869 451 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 FBXL19-AS1Q494R0 122 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 FAM201AQ5SY85 155 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 MEX3BQ6ZN04 569 aaKnown RBP13.82□□□□□ -0.2
ATG4B-225ENST00000494465 DMRTC2Q8IXT2 367 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-225ENST00000494465 CMTM1Q8IZ96 169 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 INO80EQ8NBZ0 244 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-225ENST00000494465 OR1S1Q8NH92 325 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 LILRB1Q8NHL6 650 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-225ENST00000494465 KCNIP1Q9NZI2 227 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 DNAJB11Q9UBS4 358 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 MSGN1A6NI15 193 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 TNFSF12O43508 249 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 BCL2L11O43521 198 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 UCP1P25874 307 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 TMEM268Q5VZI3 342 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 FAM222BQ8WU58 562 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 CNTNAP3BQ96NU0 1288 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 CNTNAP3Q9BZ76 1288 aa13.82□□□□□ -0.2
ATG4B-225ENST00000494465 RAI1Q7Z5J4 1906 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 SHISA9B4DS77 424 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 HSPA12AO43301 675 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 CDS2O95674 445 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 HBZP02008 142 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 CEACAM6P40199 344 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 SNTB1Q13884 538 aaKnown RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 CLLU1Q5K131 121 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 FAM53AQ6NSI3 398 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 OR13A1Q8NGR1 328 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 ANGPTL6Q8NI99 470 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 Q8TCH9 128 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 MRGPRDQ8TDS7 321 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 PCNPQ8WW12 178 aaKnown RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 UBE2J1Q9Y385 318 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 NBASA2RRP1 2371 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 ADH4P08319 380 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 CHRNB4P30926 498 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 S100A10P60903 97 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 SRPXP78539 464 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 ADORA2A-AS1P86434 159 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 LY6DQ14210 128 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 NCMAPQ5T1S8 102 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 TGIF2LYQ8IUE0 185 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 SELENOHQ8IZQ5 122 aaKnown RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 GALMQ96C23 342 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 GSX2Q9BZM3 304 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 TOLLIPQ9H0E2 274 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 RNF7Q9UBF6 113 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 FBXO9Q9UK97 447 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-225ENST00000494465 TMED3Q9Y3Q3 217 aa13.81□□□□□ -0.2
ATG4B-225ENST00000494465 KANTRA0A1W2PQU2 76 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 H0Y980 276 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 SPDEFO95238 335 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 WNT2P09544 360 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 PET100P0DJ07 73 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 S100A1P23297 94 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 TNFSF4P23510 183 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 F2RP25116 425 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 CD80P33681 288 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 CDSNQ15517 529 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 ALKAL2Q6UX46 152 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 SNX22Q96L94 193 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 LURAP1Q96LR2 239 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 DCTN5Q9BTE1 182 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 NGBQ9NPG2 151 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 DSCAML1Q8TD84 2053 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 LINC00862A6NCI5 91 aa13.8□□□□□ -0.2
ATG4B-225ENST00000494465 FAM90A27PA6NNH2 459 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms