RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 KIAA1456Q9P272 454 aa9.06□□□□□ -0.96
PDLIM1-205ENST00000493949 BOKQ9UMX3 212 aaPredicted RBP9.06□□□□□ -0.96
PDLIM1-205ENST00000493949 HDGFL3Q9Y3E1 203 aa9.06□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF726A6NNF4 738 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 SEC14L6B5MCN3 397 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 K7N7A8 449 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 M0R036 132 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 LMX1BO60663 402 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 PITX3O75364 302 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 MPZL1O95297 269 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 HSPB1P04792 205 aaKnown RBP9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 HOXB5P09067 269 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 OR8U8P0C7N1 319 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 HOXA5P20719 270 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 S100A2P29034 98 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 BLVRBP30043 206 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 GUCA1AP43080 201 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 OR3A4PP47883 348 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 CDX1P47902 265 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 BIDP55957 195 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF121P58317 390 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 FMODQ06828 376 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 BAXQ07812 192 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 PNRC1Q12796 327 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 FOXF2Q12947 444 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 C10orf128Q5T292 105 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 GGNBP1Q5YKI7 109 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 TMPPEQ6ZT21 453 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 TMEM104Q8NE00 496 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 GJC3Q8NFK1 279 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 SEMA6DQ8NFY4 1073 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 OR5L2Q8NGL0 311 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 SECTM1Q8WVN6 248 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 Q96M66 194 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 JSRP1Q96MG2 331 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 RTN4RQ9BZR6 473 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 SPACA1Q9HBV2 294 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 PARPBPQ9NWS1 579 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 MIOXQ9UGB7 285 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 ANXA10Q9UJ72 324 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 VDAC3Q9Y277 283 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 ALPK2Q86TB3 2170 aa9.05□□□□□ -0.96
PDLIM1-205ENST00000493949 A0A087WZY1 265 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM230AA0A1W2PPH8 454 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 OVOL3O00110 214 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 RAD51DO75771 328 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 VAMP5O95183 116 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF43P17038 809 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 LORP23490 312 aaPredicted RBP9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 OTX1P32242 354 aaPredicted RBP9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 SFTPDP35247 375 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 HTR5AP47898 357 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 MTCP1P56278 107 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 RND3P61587 244 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 HIST1H3AP68431 136 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 RNF4P78317 190 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 SRSF2Q01130 221 aaKnown RBP9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 TMEM187Q14656 261 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 GNMTQ14749 295 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 CNN3Q15417 329 aaKnown RBP9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 ABCA11PQ4W5N1 156 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 PDLIM3Q53GG5 364 aaPredicted RBP9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 HIST2H3PS2Q5TEC6 136 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 Q6ZS49 121 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 SLC35E3Q7Z769 313 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 COMMD2Q86X83 199 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 PRR22Q8IZ63 422 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 ZFP82Q8N141 532 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF611Q8N823 705 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF565Q8N9K5 539 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 SUMF2Q8NBJ7 301 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 UCN2Q96RP3 112 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 TRIB1Q96RU8 372 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 EIF5A2Q9GZV4 153 aaKnown RBP9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 PNRC2Q9NPJ4 139 aaKnown RBP9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 GSKIPQ9P0R6 139 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 B3GAT1Q9P2W7 334 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 RNF150Q9ULK6 438 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 NBEAL2Q6ZNJ1 2754 aa9.04□□□□□ -0.96
PDLIM1-205ENST00000493949 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A10PA6NDY2 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A18PA6NE21 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A16PA6NEW6 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A20PA6NIJ5 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A8PA6NJQ4 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A7PA6NKC0 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A22PA8MWA6 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A12PA8MX19 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A5PA8MXJ8 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A23PA8MXZ1 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 MSTNO14793 375 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 PPIHO43447 177 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 TRAF3IP2O43734 574 aaPredicted RBP9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 OR2C1O95371 312 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 SNRNP70P08621 437 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A15PP0C7V4 464 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms