RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 MED13LQ71F56 2210 aa12.27□□□□□ -0.44
ACTB-213ENST00000493945 A8MV72 311 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 C12orf77C9JDV5 145 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 SDCBPO00560 298 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 GSTZ1O43708 216 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 HBZP02008 142 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 IGHV1-8P0DP01 117 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 CCL3L1P16619 93 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 RCC1P18754 421 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 PRTN3P24158 256 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 SSTR5P35346 364 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 TAS2R19P59542 299 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 BPIFB3P59826 476 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 PAX2Q02962 417 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 PAX8Q06710 450 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 ZNF846Q147U1 533 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 GPR157Q5UAW9 335 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 CIARTQ8N365 385 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 Q8N402 240 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 OR5H2Q8NGV7 314 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 OR10J5Q8NHC4 309 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 ZNF596Q8TC21 504 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 DEDD2Q8WXF8 326 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 DACT3Q96B18 629 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 LINC00574Q9H8X3 128 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 UNKLQ9H9P5 680 aaKnown RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 OR2S2Q9NQN1 319 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 MMP26Q9NRE1 261 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 NECAP2Q9NVZ3 263 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 ANXA10Q9UJ72 324 aa12.27□□□□□ -0.45
ACTB-213ENST00000493945 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 MAP1AP78559 2803 aaPredicted RBP12.27□□□□□ -0.45
ACTB-213ENST00000493945 NPIPB11E5RHQ5 1161 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 F2RL2O00254 374 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 TOR1AO14656 332 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 FCN3O75636 299 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 NFYBP25208 207 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 IL3RAP26951 378 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 PRRX1P54821 245 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 TCF23Q7RTU1 214 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 VMO1Q7Z5L0 202 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 TMEM17Q86X19 198 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 NANPQ8TBE9 248 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 TNFRSF14Q92956 283 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 CCDC32Q9BV29 185 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 SIRPDQ9H106 197 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 YAE1D1Q9NRH1 226 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 TMEM160Q9NX00 188 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 MTFP1Q9UDX5 166 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 V9GYH0 126 aa12.26□□□□□ -0.45
ACTB-213ENST00000493945 ZNF736B4DX44 427 aaPredicted RBP12.25□□□□□ -0.45
ACTB-213ENST00000493945 SSX5O60225 188 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 IFNA6P05013 189 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 CD40LGP29965 261 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 RAB7AP51149 207 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 ARHGDIBP52566 201 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 LGALS4P56470 323 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 MADCAM1Q13477 382 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 MEF2DQ14814 521 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 C17orf58Q2M2W7 97 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 PRAMEF5Q5TYX0 476 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 CLEC9AQ6UXN8 241 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 OR5AP2Q8NGF4 316 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 OR52I2Q8NH67 350 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 BORCS5Q969J3 196 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 UPRTQ96BW1 309 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 KIRREL1Q96J84 757 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 ABHD1Q96SE0 405 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 CABLES2Q9BTV7 478 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 CLEC7AQ9BXN2 247 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 TMEM133Q9H2Q1 129 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 SIRT7Q9NRC8 400 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 SLC23A1Q9UHI7 598 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 ZNF230Q9UIE0 474 aaPredicted RBP12.25□□□□□ -0.45
ACTB-213ENST00000493945 ARHGAP32A7KAX9 2087 aa12.25□□□□□ -0.45
ACTB-213ENST00000493945 TRAV39A0A0B4J263 110 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 MEIS3P1A6NDR6 274 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 C15orf65H3BRN8 121 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 BET1O15155 118 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 CGB3P0DN86 165 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 CGB7P0DN87 165 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 GDNFP39905 211 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 CEACAM3P40198 252 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 DLX6P56179 175 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 CDK10Q15131 360 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 LTC4SQ16873 150 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 RNASE12Q5GAN4 147 aaKnown RBP12.24□□□□□ -0.45
ACTB-213ENST00000493945 RNASE10Q5GAN6 216 aaKnown RBP12.24□□□□□ -0.45
ACTB-213ENST00000493945 ZNF782Q6ZMW2 699 aaPredicted RBP12.24□□□□□ -0.45
ACTB-213ENST00000493945 TOMM5Q8N4H5 51 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 OR2AK2Q8NG84 335 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 OR9G1Q8NH87 305 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 RFESDQ8TAC1 157 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 GCDHQ92947 438 aaPredicted RBP12.24□□□□□ -0.45
ACTB-213ENST00000493945 TSC22D3Q99576 134 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 SOSTQ9BQB4 213 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 THAP7Q9BT49 309 aaPredicted RBP12.24□□□□□ -0.45
ACTB-213ENST00000493945 SRRQ9GZT4 340 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 GHITMQ9H3K2 345 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 GFOD1Q9NXC2 390 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms