RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MYPOPQ86VE0 399 aaPredicted RBP11.76□□□□□ -0.53
VCP-207ENST00000493886 OR11L1Q8NGX0 322 aa11.76□□□□□ -0.53
VCP-207ENST00000493886 EXTL1Q92935 676 aa11.76□□□□□ -0.53
VCP-207ENST00000493886 SMIM8Q96KF7 97 aa11.76□□□□□ -0.53
VCP-207ENST00000493886 GFOD1Q9NXC2 390 aa11.76□□□□□ -0.53
VCP-207ENST00000493886 A0A1W2PPE3 182 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 SLC33A1O00400 549 aaPredicted RBP11.75□□□□□ -0.53
VCP-207ENST00000493886 LYZL6O75951 148 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 SPINK2P20155 84 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 LYZL2Q7Z4W2 148 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 PRRX2Q99811 253 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 IL36RNQ9UBH0 155 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 CRYM-AS1A6NIL9 109 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 NXPH2O95156 264 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 ZNF728P0DKX0 622 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 F2RL1P55085 397 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 ABCA11PQ4W5N1 156 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 SARAFQ96BY9 339 aa11.75□□□□□ -0.53
VCP-207ENST00000493886 OR5B21A6NL26 309 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 CEACAM4O75871 244 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 IFNA21P01568 189 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 CEACAM1P13688 526 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 IDH3GP51553 393 aaPredicted RBP11.74□□□□□ -0.53
VCP-207ENST00000493886 GNG3P63215 75 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 Q6ZT83 130 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 CNEP1R1Q8N9A8 125 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 GPHA2Q96T91 129 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 AMDHD2Q9Y303 409 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 DEDDO75618 318 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 CA6P23280 308 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 CDC34P49427 236 aaPredicted RBP11.74□□□□□ -0.53
VCP-207ENST00000493886 MRPL49Q13405 166 aaKnown RBP11.74□□□□□ -0.53
VCP-207ENST00000493886 MPV17LQ2QL34 196 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 TMEM268Q5VZI3 342 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 ZNF573Q86YE8 665 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 RTN4IP1Q8WWV3 396 aaPredicted RBP11.74□□□□□ -0.53
VCP-207ENST00000493886 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 C22orf15Q8WYQ4 148 aa11.74□□□□□ -0.53
VCP-207ENST00000493886 MBPP02686 304 aaPredicted RBP11.73□□□□□ -0.53
VCP-207ENST00000493886 DAOP14920 347 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 GLP1RP43220 463 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 GABRA6Q16445 453 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
VCP-207ENST00000493886 C9orf106Q8NAJ2 232 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 CDH20Q9HBT6 801 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 NQO2P16083 231 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 KIR2DL2P43627 348 aaPredicted RBP11.73□□□□□ -0.53
VCP-207ENST00000493886 SULT1A2P50226 295 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 RBX1P62877 108 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 NHLH2Q02577 135 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 MIDNQ504T8 468 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 PYY3Q5JQD4 70 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 FBXW12Q6X9E4 464 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 OR52M1Q8NGK5 317 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 ISOC2Q96AB3 205 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 C14orf79Q96F83 325 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 KIRREL1Q96J84 757 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 ZNF488Q96MN9 340 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 RFNGQ9Y644 331 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 DUSP1P28562 367 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 PPP1CBP62140 327 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 PEA15Q15121 130 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 VWA1Q6PCB0 445 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 TMEM108Q6UXF1 575 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 TCTEX1D2Q8WW35 142 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 MOB3AQ96BX8 217 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 SAT2Q96F10 170 aaPredicted RBP11.73□□□□□ -0.53
VCP-207ENST00000493886 CLCC1Q96S66 551 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 RSRP1Q9BUV0 290 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 RPS10P5Q9NQ39 176 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
VCP-207ENST00000493886 NBEAQ8NFP9 2946 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 GOSR1O95249 250 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
VCP-207ENST00000493886 INO80CQ6PI98 192 aaPredicted RBP11.72□□□□□ -0.53
VCP-207ENST00000493886 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 OR2J1Q9GZK6 312 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 OR51I2Q9H344 312 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 PLK3Q9H4B4 646 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 PRDM13Q9H4Q3 707 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 KCNIP3Q9Y2W7 256 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 DMXL1Q9Y485 3027 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 ESPL1Q14674 2120 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 LOC400499M0QZD8 3231 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 HSPB6O14558 160 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 TM4SF5O14894 197 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 CNOT4O95628 575 aaKnown RBP11.72□□□□□ -0.53
VCP-207ENST00000493886 TSPAN15O95858 294 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 NAPSAO96009 420 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 PRH1P02810 166 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 SNRNP70P08621 437 aaKnown RBP11.72□□□□□ -0.53
VCP-207ENST00000493886 EIF5AP63241 154 aaKnown RBP11.72□□□□□ -0.53
VCP-207ENST00000493886 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
VCP-207ENST00000493886 IL24Q13007 206 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 RTP5Q14D33 572 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms