RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TGP01266 2768 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 ODF3BA8MYP8 253 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 C12orf77C9JDV5 145 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 RAB27BO00194 218 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 SDCBPO00560 298 aaPredicted RBP9.42□□□□□ -0.9
CTSA-209ENST00000493522 SPINT2O43291 252 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 ORC5O43913 435 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 FBP1P09467 338 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 CD3GP09693 182 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 CGB3P0DN86 165 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 CGB7P0DN87 165 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 HIST1H1DP16402 221 aaKnown RBP9.42□□□□□ -0.9
CTSA-209ENST00000493522 RCC1P18754 421 aaPredicted RBP9.42□□□□□ -0.9
CTSA-209ENST00000493522 TMEM50BP56557 158 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 UBA52P62987 128 aaKnown RBP9.42□□□□□ -0.9
CTSA-209ENST00000493522 MRPS15P82914 257 aaKnown RBP9.42□□□□□ -0.9
CTSA-209ENST00000493522 MIDNQ504T8 468 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 OLFML2AQ68BL7 652 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 ZNF626Q68DY1 528 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 RAB2BQ8WUD1 216 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 PHF21AQ96BD5 680 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 SLC25A38Q96DW6 304 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 CMSS1Q9BQ75 279 aaKnown RBP9.42□□□□□ -0.9
CTSA-209ENST00000493522 HDHD3Q9BSH5 251 aaPredicted RBP9.42□□□□□ -0.9
CTSA-209ENST00000493522 RAB9BQ9NP90 201 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 ESM1Q9NQ30 184 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 C12orf4Q9NQ89 552 aa9.42□□□□□ -0.9
CTSA-209ENST00000493522 PRKDCP78527 4128 aaKnown RBP9.41□□□□□ -0.9
CTSA-209ENST00000493522 IGHV3-43A0A0B4J1X8 118 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 C15orf65H3BRN8 121 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 MFNGO00587 321 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 TOR1AO14656 332 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 TMEM127O75204 238 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 SCGNO76038 276 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 NAPSAO96009 420 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 HBZP02008 142 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 IGHV3-43DP0DP04 118 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 HKR1P10072 659 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 GNB3P16520 340 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 GZMHP20718 246 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 GNG10P50151 68 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 BAMBIQ13145 260 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 ARFRP1Q13795 201 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 ABHD12Q8N2K0 398 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 SAMD12Q8N8I0 201 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 OR11H6Q8NGC7 330 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 OR1L1Q8NH94 360 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 LEAP2Q969E1 77 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 DUX5Q96PT3 197 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 RIMS4Q9H426 269 aaPredicted RBP9.41□□□□□ -0.9
CTSA-209ENST00000493522 ZMAT3Q9HA38 289 aaKnown RBP9.41□□□□□ -0.9
CTSA-209ENST00000493522 TAF9BQ9HBM6 251 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 SPATA2Q9UM82 520 aa9.41□□□□□ -0.9
CTSA-209ENST00000493522 TBL2Q9Y4P3 447 aaKnown RBP9.41□□□□□ -0.9
CTSA-209ENST00000493522 CCDC160A6NGH7 325 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 HOXA3O43365 443 aaPredicted RBP9.4□□□□□ -0.9
CTSA-209ENST00000493522 IGHV3-7P01780 117 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 MELTFP08582 738 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 CD34P28906 385 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 RORCP51449 518 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 TMBIM6P55061 237 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 HLA-DRB3P79483 266 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 SPCS2Q15005 226 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 ARL6IP1Q15041 203 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 TUSC1Q2TAM9 212 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 PLA1AQ53H76 456 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 UBE2NLQ5JXB2 153 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 UTF1Q5T230 341 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 LHFPL4Q7Z7J7 247 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 OR10A7Q8NGE5 316 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 OR9G1Q8NH87 305 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 ZNF596Q8TC21 504 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 C17orf50Q8WW18 174 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 KCTD12Q96CX2 325 aaKnown RBP9.4□□□□□ -0.9
CTSA-209ENST00000493522 BCL7BQ9BQE9 202 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 LINC00574Q9H8X3 128 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 TNFRSF19Q9NS68 423 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 MBNL3Q9NUK0 354 aaKnown RBP9.4□□□□□ -0.9
CTSA-209ENST00000493522 GFOD1Q9NXC2 390 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 ZNRD1Q9P1U0 126 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 GNG12Q9UBI6 72 aa9.4□□□□□ -0.9
CTSA-209ENST00000493522 A0A087X0M5 115 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 A0A1B0GX30 115 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 TMEM235A6NFC5 223 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 SERPINE3A8MV23 424 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 F2RL2O00254 374 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 PAX6P26367 422 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 HTR1DP28221 377 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 TALDO1P37837 337 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 PRRX1P54821 245 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 HMGN3Q15651 99 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 HLA-DRB5Q30154 266 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 TMEM30BQ3MIR4 351 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 PDLIM3Q53GG5 364 aaPredicted RBP9.39□□□□□ -0.91
CTSA-209ENST00000493522 Q6YL49 198 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 Q6ZPA2 131 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 C5orf24Q7Z6I8 188 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms