RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 DGCR2P98153 550 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 HMGN3Q15651 99 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 PYHIN1Q6K0P9 492 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 FAM53AQ6NSI3 398 aaPredicted RBP12.91□□□□□ -0.34
HPS4-216ENST00000493455 ZNF880Q6PDB4 577 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 PNKDQ8N490 385 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 ABHD1Q96SE0 405 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
HPS4-216ENST00000493455 MBNL3Q9NUK0 354 aaKnown RBP12.91□□□□□ -0.34
HPS4-216ENST00000493455 SESN1Q9Y6P5 492 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 TRBV6-6A0A0A6YYG2 114 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 TRDCB7Z8K6 153 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 C15orf65H3BRN8 121 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 BET1O15155 118 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 LPLP06858 475 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 GSTT2P0CG29 244 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 GSTT2BP0CG30 244 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 CGB3P0DN86 165 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 CGB7P0DN87 165 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 MMP9P14780 707 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 HOXB4P17483 251 aaPredicted RBP12.9□□□□□ -0.34
HPS4-216ENST00000493455 DTYMKP23919 212 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 FAM120AOSQ5T036 256 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 OR52W1Q6IF63 320 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 CCDC190Q86UF4 302 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 BEST4Q8NFU0 473 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 OR52L2PQ8NGH6 319 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 OR52I2Q8NH67 350 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 GNG12Q9UBI6 72 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 OPN4Q9UHM6 478 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 MGAT4AQ9UM21 535 aa12.9□□□□□ -0.34
HPS4-216ENST00000493455 A0A1W2PPE3 182 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 FABP7O15540 132 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 HSPA12AO43301 675 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 IGHV4-38-2P0DP08 117 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 PRTN3P24158 256 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 FPR2P25090 351 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 SRP14P37108 136 aaKnown RBP12.89□□□□□ -0.35
HPS4-216ENST00000493455 KIR2DS4P43632 304 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 CBX5P45973 191 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 ARPC4P59998 168 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 GNMTQ14749 295 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 KIR2DS1Q14954 304 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 IGSF11Q5DX21 431 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 UTF1Q5T230 341 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 RUSC1-AS1Q66K80 236 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
HPS4-216ENST00000493455 C11orf42Q8N5U0 333 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 C15orf40Q8WUR7 153 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 FCAMRQ8WWV6 532 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 GALMQ96C23 342 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 TMEM133Q9H2Q1 129 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 OR2S2Q9NQN1 319 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 SLC23A1Q9UHI7 598 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 V9GYH0 126 aa12.89□□□□□ -0.35
HPS4-216ENST00000493455 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
HPS4-216ENST00000493455 HIVEP1P15822 2718 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 NPIPB11E5RHQ5 1161 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 RNASEK-C17orf49H0YIS7 233 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 HNF1AP20823 631 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 PPP1CCP36873 323 aaKnown RBP12.88□□□□□ -0.35
HPS4-216ENST00000493455 CHRFAM7AQ494W8 412 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 BRD3OSQ6XYD6 125 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 C1orf122Q6ZSJ8 110 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 OR13D1Q8NGV5 346 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 GPX8Q8TED1 209 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 UPRTQ96BW1 309 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 OCSTAMPQ9BR26 566 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 HEXA-AS1Q9H8Q6 139 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 SCPEP1Q9HB40 452 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 OR1A1Q9P1Q5 309 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 KLK11Q9UBX7 282 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 F8P00451 2351 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 TLN2Q9Y4G6 2542 aa12.88□□□□□ -0.35
HPS4-216ENST00000493455 INAFM1C9JVW0 142 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 TOR1AO14656 332 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 RBP4P02753 201 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 ARG1P05089 322 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 HLA-DMAP28067 261 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 NCR3LG1Q68D85 454 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 ABHD12Q8N2K0 398 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 OR4A4PQ8NGN8 299 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 NANPQ8TBE9 248 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 GINS4Q9BRT9 223 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 GFOD1Q9NXC2 390 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 ZNRD1Q9P1U0 126 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 RABL2AQ9UBK7 228 aaPredicted RBP12.87□□□□□ -0.35
HPS4-216ENST00000493455 ANXA10Q9UJ72 324 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 RABL2BQ9UNT1 228 aa12.87□□□□□ -0.35
HPS4-216ENST00000493455 IGHV2-26A0A0B4J1V2 119 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 IGKV1-6A0A0C4DH72 117 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 CENPVL3A0A0U1RRI6 287 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 GABARAPH6UMI1 98 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 J3QRK9 145 aa12.86□□□□□ -0.35
HPS4-216ENST00000493455 F2RL2O00254 374 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms