RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 HLA-DRB3P79483 266 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 DGCR2P98153 550 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 PAX8Q06710 450 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 ZNF880Q6PDB4 577 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 TRAT1Q6PIZ9 186 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 VMO1Q7Z5L0 202 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 Q8N7P7 452 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 OR52I2Q8NH67 350 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 C15orf40Q8WUR7 153 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 SUCNR1Q9BXA5 334 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 ZNF286AQ9HBT8 521 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 IDI2-AS1Q9NZ38 188 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 IGHV3OR16-10A0A075B7F0 116 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 IGKV1D-8A0A087WSZ0 117 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 IGHV3-43A0A0B4J1X8 118 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 C17orf98A8MV24 154 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 TRDCB7Z8K6 153 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 C15orf65H3BRN8 121 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 M0R1W7 72 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 ORC5O43913 435 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 IGHV3-7P01780 117 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 SCTP09683 121 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 CGB3P0DN86 165 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 CGB7P0DN87 165 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 IGHV3-43DP0DP04 118 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 GATA3P23771 443 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 COX7A1P24310 79 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 CBX5P45973 191 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 KIR3DL3Q8N743 410 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 GPX8Q8TED1 209 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 FCAMRQ8WWV6 532 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 KIRREL1Q96J84 757 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 SOSTQ9BQB4 213 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 TMPRSS13Q9BYE2 586 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 SIRPDQ9H106 197 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 SCPEP1Q9HB40 452 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 KPTNQ9Y664 436 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 DSCAML1Q8TD84 2053 aa14.09□□□□□ -0.15
LIME1-208ENST00000493265 KIAA2026Q5HYC2 2103 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 A0A1W2PRD5 423 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 A0A1W2PRF3 423 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 A0A1W2PRM7 423 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 SDCBPO00560 298 aaPredicted RBP14.08□□□□□ -0.16
LIME1-208ENST00000493265 GSTT2P0CG29 244 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 GSTT2BP0CG30 244 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 IGHV1-8P0DP01 117 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 KLRD1Q13241 179 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 HMGN3Q15651 99 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 CR1LQ2VPA4 569 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 OR52W1Q6IF63 320 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 FAM53AQ6NSI3 398 aaPredicted RBP14.08□□□□□ -0.16
LIME1-208ENST00000493265 C11orf42Q8N5U0 333 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 BEST4Q8NFU0 473 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 OR10V1Q8NGI7 309 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 LEAP2Q969E1 77 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 LHX4Q969G2 390 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 TBX15Q96SF7 602 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 OCSTAMPQ9BR26 566 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 METTL8Q9H825 291 aaKnown RBP14.08□□□□□ -0.16
LIME1-208ENST00000493265 RABL2AQ9UBK7 228 aaPredicted RBP14.08□□□□□ -0.16
LIME1-208ENST00000493265 OPN4Q9UHM6 478 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 MGAT4AQ9UM21 535 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 RABL2BQ9UNT1 228 aa14.08□□□□□ -0.16
LIME1-208ENST00000493265 J3QLI3 93 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 BET1O15155 118 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 FABP7O15540 132 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 TPPPO94811 219 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 AVPP01185 164 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 MMP9P14780 707 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 KIR2DS4P43632 304 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 ARPC4P59998 168 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 KIR2DS1Q14954 304 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 ZNF79Q15937 498 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 UTF1Q5T230 341 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 HEPN1Q6WQI6 88 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 IL17RELQ6ZVW7 336 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 HOGA1Q86XE5 327 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 OR52L2PQ8NGH6 319 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 GALMQ96C23 342 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 RAB9BQ9NP90 201 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 GNG12Q9UBI6 72 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 KLK11Q9UBX7 282 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 SESN1Q9Y6P5 492 aa14.07□□□□□ -0.16
LIME1-208ENST00000493265 A8MV72 311 aaPredicted RBP14.06□□□□□ -0.16
LIME1-208ENST00000493265 NPIPB11E5RHQ5 1161 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 GABARAPH6UMI1 98 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 SULT1C2O00338 296 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 RBBP9O75884 186 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 IFNA2P01563 188 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 FPR2P25090 351 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 ETV6P41212 452 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 GNG10P50151 68 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 GNMTQ14749 295 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 CHRFAM7AQ494W8 412 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 IGSF11Q5DX21 431 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 MFSD4AQ8N468 514 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 PNKDQ8N490 385 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 SMIM4Q8WVI0 70 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 SNAPC3Q92966 411 aa14.06□□□□□ -0.16
LIME1-208ENST00000493265 DMRTB1Q96MA1 342 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms