RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TRIQKQ629K1 86 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 ZNF880Q6PDB4 577 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 TRAT1Q6PIZ9 186 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 HOGA1Q86XE5 327 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 UBALD1Q8TB05 177 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 ARL11Q969Q4 196 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 JMJD8Q96S16 334 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 THAP7Q9BT49 309 aaPredicted RBP11.04□□□□□ -0.64
MSH6-208ENST00000493177 SUCNR1Q9BXA5 334 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 NCOR1P1Q9H4R4 102 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 UBE2J1Q9Y385 318 aaPredicted RBP11.04□□□□□ -0.64
MSH6-208ENST00000493177 LINC00312Q9Y6C7 94 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 A0A0A6YYJ9 748 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 KIR2DS1A0A191URI9 304 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 POM121CA8CG34 1229 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 AVPP01185 164 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 LIPFP07098 398 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 CCL3L1P16619 93 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 GZMHP20718 246 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 FPR2P25090 351 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 CD40LGP29965 261 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 GDNFP39905 211 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 KIR2DS4P43632 304 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 PPP5CP53041 499 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 ARPC4P59998 168 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 KIR2DS1Q14954 304 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 LTC4SQ16873 150 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 C11orf91Q3C1V1 193 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 Q6ZPA2 131 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 TCF23Q7RTU1 214 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 RFESDQ8TAC1 157 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 CORO2AQ92828 525 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 ZNF714Q96N38 554 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 GAL3ST2Q9H3Q3 398 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 TAF9BQ9HBM6 251 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 MMP26Q9NRE1 261 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 MBNL3Q9NUK0 354 aaKnown RBP11.03□□□□□ -0.64
MSH6-208ENST00000493177 CALYQ9NYX4 217 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 KLK11Q9UBX7 282 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 MTFP1Q9UDX5 166 aa11.03□□□□□ -0.64
MSH6-208ENST00000493177 IGHV2-70DA0A0C4DH43 119 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 ZNF729A6NN14 1252 aaPredicted RBP11.02□□□□□ -0.65
MSH6-208ENST00000493177 C12orf77C9JDV5 145 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 FABP7O15540 132 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 SPINT2O43291 252 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 LANCL1O43813 399 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 SCTP09683 121 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 GSTT2P0CG29 244 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 GSTT2BP0CG30 244 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 ZNF728P0DKX0 622 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 HLA-DMAP28067 261 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 SSTR5P35346 364 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 HMGN3Q15651 99 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 BAK1Q16611 211 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 ZNF57Q68EA5 555 aaPredicted RBP11.02□□□□□ -0.65
MSH6-208ENST00000493177 OR52W1Q6IF63 320 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 RBMS3Q6XE24 437 aaKnown RBP11.02□□□□□ -0.65
MSH6-208ENST00000493177 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
MSH6-208ENST00000493177 C5orf24Q7Z6I8 188 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 LY6G5BQ8NDX9 201 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 OR1L1Q8NH94 360 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 C8orf46Q8TAG6 207 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 IL1F10Q8WWZ1 152 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 SDHCQ99643 169 aaPredicted RBP11.02□□□□□ -0.65
MSH6-208ENST00000493177 SLC6A7Q99884 636 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 CCDC32Q9BV29 185 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 RAB9BQ9NP90 201 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 ABCB10Q9NRK6 738 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 TAS2R3Q9NYW6 316 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 OPN4Q9UHM6 478 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 INSIG2Q9Y5U4 225 aa11.02□□□□□ -0.65
MSH6-208ENST00000493177 IGKV1D-8A0A087WSZ0 117 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 KBTBD11-OT1A0A1B0GTJ5 212 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 TRIM77I1YAP6 450 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 ORC5O43913 435 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 HBZP02008 142 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 PMP2P02689 132 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 CSF1P09603 554 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 OMGP23515 440 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 OR3A3P47888 321 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 ARF6P62330 175 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 SSBP1Q04837 148 aaKnown RBP11.01□□□□□ -0.65
MSH6-208ENST00000493177 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
MSH6-208ENST00000493177 C17orf58Q2M2W7 97 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 PRAMEF5Q5TYX0 476 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 TOMM5Q8N4H5 51 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 OR4A4PQ8NGN8 299 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 OR5H2Q8NGV7 314 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 SNAPC3Q92966 411 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 KIRREL1Q96J84 757 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 TAS2R8Q9NYW2 309 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 IDI2-AS1Q9NZ38 188 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 ANXA10Q9UJ72 324 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 ANAPC10Q9UM13 185 aa11.01□□□□□ -0.65
MSH6-208ENST00000493177 LINC00854A0A1B0GVQ3 168 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms