RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 TRAPPC2LQ9UL33 140 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 CELP19835 753 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 CAPGP40121 348 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 VHLP40337 213 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 TAS2R43P59537 309 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 RPL23AP62750 156 aaKnown RBP13.63□□□□□ -0.23
SGMS1-204ENST00000492601 EBI3Q14213 229 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 AHSA2Q719I0 299 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 C8orf59Q8N0T1 100 aaPredicted RBP13.63□□□□□ -0.23
SGMS1-204ENST00000492601 LINC00482Q8N8I6 264 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 OR10V1Q8NGI7 309 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 RTN4IP1Q8WWV3 396 aaPredicted RBP13.63□□□□□ -0.23
SGMS1-204ENST00000492601 RBMXL1Q96E39 390 aaKnown RBP13.63□□□□□ -0.23
SGMS1-204ENST00000492601 RCC1LQ96I51 464 aaKnown RBP13.63□□□□□ -0.23
SGMS1-204ENST00000492601 SELENOIQ9C0D9 397 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 CNOT2Q9NZN8 540 aaKnown RBP13.63□□□□□ -0.23
SGMS1-204ENST00000492601 RCC2Q9P258 522 aaKnown RBP13.63□□□□□ -0.23
SGMS1-204ENST00000492601 GNG12Q9UBI6 72 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 PEX16Q9Y5Y5 336 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 COL7A1Q02388 2944 aa13.63□□□□□ -0.23
SGMS1-204ENST00000492601 NUDT19A8MXV4 375 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 ZNF736B4DX44 427 aaPredicted RBP13.62□□□□□ -0.23
SGMS1-204ENST00000492601 MYL12BO14950 172 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 SPINT2O43291 252 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 CRTAPO75718 401 aaPredicted RBP13.62□□□□□ -0.23
SGMS1-204ENST00000492601 IGHG2P01859 326 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 MGMTP16455 207 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 IL3RAP26951 378 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 ETV3LQ6ZN32 361 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 C8orf86Q6ZUL3 223 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 IZUMO1Q8IYV9 350 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 Q8N6K4 173 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 C8orf31Q8N9H6 132 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 TMEM104Q8NE00 496 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 BPIFB6Q8NFQ5 453 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 OR2T10Q8NGZ9 312 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 OR1L1Q8NH94 360 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 MRPS24Q96EL2 167 aaKnown RBP13.62□□□□□ -0.23
SGMS1-204ENST00000492601 PSORS1C1Q9UIG5 152 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 DNAH9Q9NYC9 4486 aa13.62□□□□□ -0.23
SGMS1-204ENST00000492601 UBE2QL1A1L167 161 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 HBZP02008 142 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 RCC1P18754 421 aaPredicted RBP13.61□□□□□ -0.23
SGMS1-204ENST00000492601 HOXD3P31249 432 aaPredicted RBP13.61□□□□□ -0.23
SGMS1-204ENST00000492601 ZNF134P52741 427 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 WNT4P56705 351 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 KRTAP10-11P60412 298 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 SLC35B1P78383 322 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 C6orf183Q5T699 404 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 OR2W3Q7Z3T1 314 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 TGIF2LXQ8IUE1 241 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 FOXRED2Q8IWF2 684 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 MRPL41Q8IXM3 137 aaKnown RBP13.61□□□□□ -0.23
SGMS1-204ENST00000492601 STPG2Q8N412 459 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 ZNF439Q8NDP4 499 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 OR51D1Q8NGF3 324 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 ST6GALNAC6Q969X2 333 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 FAM46BQ96A09 425 aa13.61□□□□□ -0.23
SGMS1-204ENST00000492601 K7EIL1 84 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 CD1BP29016 333 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 GPR12P47775 334 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 THBS3P49746 956 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 INSL4Q14641 139 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 CT45A1Q5HYN5 189 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 SLC25A48Q6ZT89 311 aaKnown RBP13.6□□□□□ -0.23
SGMS1-204ENST00000492601 C5orf24Q7Z6I8 188 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 CDH26Q8IXH8 852 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 NANOGP1Q8N7R0 232 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 Q8N9W7 124 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 KLHL30-AS1Q8NEE0 82 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 CT45A3Q8NHU0 189 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 TFAP2CQ92754 450 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 Q96M66 194 aa13.6□□□□□ -0.23
SGMS1-204ENST00000492601 WI2-2373I1.2A0A1W2PRP0 233 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 DUS4LO95620 317 aaKnown RBP13.59□□□□□ -0.23
SGMS1-204ENST00000492601 MOSP00540 346 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 FUT3P21217 361 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 Q3ZCU0 254 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 OGFRL1Q5TC84 451 aaPredicted RBP13.59□□□□□ -0.23
SGMS1-204ENST00000492601 SIGIRRQ6IA17 410 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 LYPD6Q86Y78 171 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 GAPTQ8N292 157 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 FBLIM1Q8WUP2 373 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 DUX3Q96PT4 197 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 S1PR3Q99500 378 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 ABCG5Q9H222 651 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 TAF9BQ9HBM6 251 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 RAB9BQ9NP90 201 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 PLSCR3Q9NRY6 295 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 PLCXD1Q9NUJ7 323 aa13.59□□□□□ -0.23
SGMS1-204ENST00000492601 LIN7CQ9NUP9 197 aaKnown RBP13.59□□□□□ -0.23
SGMS1-204ENST00000492601 FAM90A10PA6NDY2 464 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 FAM90A7PA6NKC0 464 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 FAM90A23PA8MXZ1 464 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 AP4M1O00189 453 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 SC5DO75845 299 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 CD1AP06126 327 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 MAPK3P27361 379 aaPredicted RBP13.58□□□□□ -0.24
SGMS1-204ENST00000492601 F2RL1P55085 397 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms