RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 SELENOHQ8IZQ5 122 aaKnown RBP18.31■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 OR1K1Q8NGR3 316 aa18.31■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 SLC45A2Q9UMX9 530 aa18.31■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 SLC22A20A6NK97 555 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 GALR2O43603 387 aaPredicted RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 LINC00596Q86U02 117 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 RFESDQ8TAC1 157 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 CA5BP1Q8WTZ4 195 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 CISD1Q9NZ45 108 aaKnown RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 NKX6-3A6NJ46 265 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 OR5G3P0C626 314 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 BPIFB3P59826 476 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 ERHP84090 104 aaKnown RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 OR5A2Q8NGI9 324 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 BOD1Q96IK1 185 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 COMMD5Q9GZQ3 224 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 RPLP1P05386 114 aaKnown RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 AMTP48728 403 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FABP6P51161 128 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 MEF2BQ02080 365 aaPredicted RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 GAB4Q2WGN9 574 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 AARDQ4LEZ3 155 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 VASH2Q86V25 355 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 ZNF501Q96CX3 271 aaPredicted RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 RNPS1Q15287 305 aaKnown RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 PRR27Q6MZM9 219 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 REC114Q7Z4M0 266 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 HLA-CQ95604 372 aa18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 MARS2Q96GW9 593 aaKnown RBP18.3■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 LOC390937A0A1W2PQ73 354 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 ZNF343Q6P1L6 599 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 OR8G5Q8NG78 346 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 TPPP3Q9BW30 176 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM117AQ9C073 453 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FBLN5Q9UBX5 448 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 OR5AU1Q8NGC0 362 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 OR5D13Q8NGL4 314 aa18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 MTCL1Q9Y4B5 1905 aaKnown RBP18.29■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 ZNF729A6NN14 1252 aaPredicted RBP18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 DEFB108AA8MXU0 73 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 ZNF506Q5JVG8 444 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 CXorf67Q86X51 503 aaPredicted RBP18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 ZNF784Q8NCA9 323 aaPredicted RBP18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 ACY3Q96HD9 319 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 MSL2Q9HCI7 577 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 A0A1W2PR80 420 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 UBE2CO00762 179 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 SRP14P37108 136 aaKnown RBP18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 IGKV1D-43A0A0B4J1Z2 117 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 SCTP09683 121 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 HLA-BQ31612 363 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 PLPPR2Q96GM1 343 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 LOXL2Q9Y4K0 774 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 K7EQM0 130 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 HOXA5P20719 270 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 SCGB2A2Q13296 93 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 POM121L2Q96KW2 1035 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 TRIB1Q96RU8 372 aa18.28■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 C1QL2Q7Z5L3 287 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 GALNT14Q96FL9 552 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A10PA6NDY2 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A18PA6NE21 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A16PA6NEW6 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A20PA6NIJ5 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A8PA6NJQ4 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A7PA6NKC0 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A22PA8MWA6 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A12PA8MX19 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A5PA8MXJ8 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A23PA8MXZ1 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A15PP0C7V4 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A13PP0C7W8 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A14PP0C7W9 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FAM90A24PP0C7X0 464 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 OR4C5Q8NGB2 326 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 TPRP12270 2363 aaKnown RBP18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 NDUFB7P17568 137 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 COX19Q49B96 90 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 TRAT1Q6PIZ9 186 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 TM2D1Q9BX74 207 aa18.27■□□□□ 0.52
CHKB-CPT1B-203ENST00000492556 FGF12P61328 243 aa18.27■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 PSG4Q00888 419 aa18.27■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 TRA2AQ13595 282 aaKnown RBP eCLIP18.27■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 TBX15Q96SF7 602 aa18.27■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 PCGF1Q9BSM1 259 aa18.27■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 SH2D2AQ9NP31 389 aa18.27■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 COX7A2P2O60397 106 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 FOLR2P14207 255 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 SNAI3Q3KNW1 292 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 ZBTB34Q8NCN2 500 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 MRGPRDQ8TDS7 321 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 TMEM230Q96A57 120 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 TIMP4Q99727 224 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 IL17BQ9UHF5 180 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 TRAV34A0A0B4J273 112 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 A0A0J9YW62 118 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 A0A1B0GV90 55 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 J3QT63 122 aa18.26■□□□□ 0.51
CHKB-CPT1B-203ENST00000492556 CRYAAP02489 173 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms