RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SLC6A1P30531 599 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 ATP5IP56385 69 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-212ENST00000492407 ISL1P61371 349 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 SLC35A2P78381 396 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 ATP6AP1Q15904 470 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 RNF212Q495C1 297 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 PLA1AQ53H76 456 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 TOR2AQ5JU69 321 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 HACD4Q5VWC8 232 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 HIST2H2BDQ6DRA6 164 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 CCDC144NLQ6NUI1 221 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 CENPVQ7Z7K6 275 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-212ENST00000492407 ZDHHC13Q8IUH4 622 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 SAXO1Q8IYX7 474 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 ABHD12Q8N2K0 398 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 CHST4Q8NCG5 386 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 OR52N4Q8NGI2 321 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 OR4P4Q8NGL7 312 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 NDNFQ8TB73 568 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 TRMT10AQ8TBZ6 339 aaKnown RBP7.31□□□□□ -1.24
HDAC3-212ENST00000492407 EMG1Q92979 244 aaKnown RBP7.31□□□□□ -1.24
HDAC3-212ENST00000492407 SLAMF9Q96A28 289 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 IL4I1Q96RQ9 567 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 HMG20AQ9NP66 347 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 PEF1Q9UBV8 284 aaKnown RBP7.31□□□□□ -1.24
HDAC3-212ENST00000492407 HILPDAQ9Y5L2 63 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 CEPT1Q9Y6K0 416 aa7.31□□□□□ -1.24
HDAC3-212ENST00000492407 DNAH3Q8TD57 4116 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 TCRBV4S1A1TA0A5B7 111 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 CBY3A6NI87 242 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 A6NIN4 97 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 MAGEB4O15481 346 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-212ENST00000492407 PSPNO60542 156 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 ENTPD6O75354 484 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 CLIC3O95833 236 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 PRB2P02812 416 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-212ENST00000492407 H2AFB1P0C5Y9 115 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 TRAPPC2P0DI81 140 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 TRAPPC2BP0DI82 140 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 FCGR1AP12314 374 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 GABRR1P24046 479 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 FASP25445 335 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 MTCP1P56278 107 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 PDZK1IP1Q13113 114 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 IL18Q14116 193 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 EDDM3AQ14507 147 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 SLC25A30Q5SVS4 291 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 SSX6Q7RTT6 188 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 FAM220AQ7Z4H9 259 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 BCDIN3DQ7Z5W3 292 aaKnown RBP7.3□□□□□ -1.24
HDAC3-212ENST00000492407 FOXRED2Q8IWF2 684 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 LYG1Q8N1E2 194 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 OR4X2Q8NGF9 303 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 SLC7A6OSQ96CW6 309 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-212ENST00000492407 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-212ENST00000492407 TTTY10Q9BZA0 68 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 COMMD4Q9H0A8 199 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 Q9H521 79 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 SDHAF2Q9NX18 166 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 HHLA2Q9UM44 414 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 RNF24Q9Y225 148 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 PLXNB1O43157 2135 aa7.3□□□□□ -1.24
HDAC3-212ENST00000492407 IGKV1-9A0A0C4DH69 117 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 LOC107986453A0A1B0GWG9 222 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 A4D1N5 150 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 LY6LH3BQJ8 138 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 MITFO75030 526 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-212ENST00000492407 MED6O75586 246 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 KDM4BO94953 1096 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 IGHA1P01876 353 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 HCKP08631 526 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 FAM106CPP0CH98 169 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 ATF1P18846 271 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 CD40LGP29965 261 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 CEACAM6P40199 344 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 MNDAP41218 407 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 OR3A1P47881 315 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 CDC34P49427 236 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-212ENST00000492407 AP3S2P59780 193 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 ACTBP60709 375 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 ASAH1Q13510 395 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 ZIK1Q3SY52 487 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-212ENST00000492407 VAX1Q5SQQ9 334 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 DNLZQ5SXM8 178 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 Q6ZS46 218 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 TRAPPC6BQ86SZ2 158 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 TMEM17Q86X19 198 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 BATF2Q8N1L9 274 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 PRSS35Q8N3Z0 413 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 OR4D6Q8NGJ1 314 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 MBOAT4Q96T53 435 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 MND1Q9BWT6 205 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 GABARAPL3Q9BY60 117 aa7.29□□□□□ -1.24
HDAC3-212ENST00000492407 EXOSC4Q9NPD3 245 aaKnown RBP7.29□□□□□ -1.24
HDAC3-212ENST00000492407 RBFOX1Q9NWB1 397 aaKnown RBP7.29□□□□□ -1.24
HDAC3-212ENST00000492407 A0A1B0GV90 55 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 C9orf170A2RU37 121 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A18PA6NE21 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A16PA6NEW6 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A20PA6NIJ5 464 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms