RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 OR8H3Q8N146 312 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 OR4K15Q8NH41 348 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 OR56B4Q8NH76 319 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 FAM110DQ8TAY7 271 aaPredicted RBP12.07□□□□□ -0.48
USP39-217ENST00000491659 UBALD1Q8TB05 177 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 TMEM203Q969S6 136 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 GFOD1Q9NXC2 390 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 RAB26Q9ULW5 256 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 A0A1W2PPI3 338 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 UBE2QL1A1L167 161 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 C12orf77C9JDV5 145 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 HSD17B6O14756 317 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 ARL6IP5O75915 188 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
USP39-217ENST00000491659 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 CPEP16870 476 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 HTR2CP28335 458 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 HES1Q14469 280 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 Q3ZCU0 254 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 ABCA11PQ4W5N1 156 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 C1orf100Q5SVJ3 147 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 Q6ZS46 218 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 GAPTQ8N292 157 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 PRR18Q8N4B5 295 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 DRAM1Q8N682 238 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 OR6M1Q8NGM8 313 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 TMEM59Q9BXS4 323 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 GNG12Q9UBI6 72 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 MOB4Q9Y3A3 225 aa12.06□□□□□ -0.48
USP39-217ENST00000491659 MEGF8Q7Z7M0 2845 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 CCRL2O00421 344 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 LPLP06858 475 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 VSIG8P0DPA2 414 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 CD28P10747 220 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 MAP2K4P45985 399 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 LOXL3P58215 753 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 RPS27AP62979 156 aaKnown RBP12.05□□□□□ -0.48
USP39-217ENST00000491659 ZNF816Q0VGE8 651 aaPredicted RBP12.05□□□□□ -0.48
USP39-217ENST00000491659 TBCEQ15813 527 aaPredicted RBP12.05□□□□□ -0.48
USP39-217ENST00000491659 FBLN7Q53RD9 439 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 HIST2H2BDQ6DRA6 164 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 SIGIRRQ6IA17 410 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 ZNF367Q7RTV3 350 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 LINC00311Q8N616 119 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 C8orf31Q8N9H6 132 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 KCNG3Q8TAE7 436 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 NEDD4LQ96PU5 975 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 MGLLQ99685 303 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 OCSTAMPQ9BR26 566 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 WNT10AQ9GZT5 417 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 PLGRKTQ9HBL7 147 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 KCNIP1Q9NZI2 227 aa12.05□□□□□ -0.48
USP39-217ENST00000491659 WNK1Q9H4A3 2382 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 FAM90A9PA6NNJ1 464 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 SLC22A1O15245 554 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 BPNT1O95861 308 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 HBZP02008 142 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 GAPDHP04406 335 aaKnown RBP12.04□□□□□ -0.48
USP39-217ENST00000491659 TMEM11P17152 192 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 DIAPH2-AS1Q14236 149 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 C9orf152Q5JTZ5 239 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 OR10K2Q6IF99 312 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 TMEM91Q6ZNR0 172 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 MOB3BQ86TA1 216 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 MRPL30Q8TCC3 161 aaKnown RBP12.04□□□□□ -0.48
USP39-217ENST00000491659 WIPF2Q8TF74 440 aaPredicted RBP12.04□□□□□ -0.48
USP39-217ENST00000491659 KCNK15Q9H427 330 aa12.04□□□□□ -0.48
USP39-217ENST00000491659 IGHV1-3A0A0C4DH29 117 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 TXNL1O43396 289 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 IGKV1D-33P01593 117 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 IGKV1-33P01594 117 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 RCC1P18754 421 aaPredicted RBP12.03□□□□□ -0.48
USP39-217ENST00000491659 CHATP28329 748 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 DEFA6Q01524 100 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 UNC119Q13432 240 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 ZNF554Q86TJ5 538 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 LYG1Q8N1E2 194 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 TM2D1Q9BX74 207 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 TAF9BQ9HBM6 251 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 MBNL3Q9NUK0 354 aaKnown RBP12.03□□□□□ -0.48
USP39-217ENST00000491659 VWFP04275 2813 aa12.03□□□□□ -0.48
USP39-217ENST00000491659 SH2D7A6NKC9 451 aaPredicted RBP12.02□□□□□ -0.49
USP39-217ENST00000491659 TMEM14DPA8MWL7 114 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 SLC17A2O00624 439 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 WIPF1O43516 503 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 AMY1AP04745 511 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 AMY2AP04746 511 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 ARSBP15848 533 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
USP39-217ENST00000491659 RANBP1P43487 201 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 REG1BP48304 166 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 GABARAPL2P60520 117 aa12.02□□□□□ -0.49
USP39-217ENST00000491659 EMX1Q04741 257 aaPredicted RBP12.02□□□□□ -0.49
USP39-217ENST00000491659 P2RY14Q15391 338 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms