RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 A0A087WUJ7 227 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 IGHV3-74A0A0B4J1X5 117 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 A0A0G2JMP0 313 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 TSTD3H0UI37 97 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 MANBAO00462 879 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 IFNA1P01562 189 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 HLA-DPB1P04440 258 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 GUSBP08236 651 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF286BP0CG31 522 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 PRSS3P35030 304 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 REG1BP48304 166 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 GTF2A1P52655 376 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 H2BFSP57053 126 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 RAB5BP61020 215 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 HIST1H3AP68431 136 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 H3F3AP84243 136 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 IFITM2Q01629 132 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 CDK10Q15131 360 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 BATFQ16520 125 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMEM215Q68D42 235 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 SFXN4Q6P4A7 337 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 FBXW12Q6X9E4 464 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 HIST2H3AQ71DI3 136 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 PHF13Q86YI8 300 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 RNF182Q8N6D2 247 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR4M2Q8NGB6 313 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 MCFD2Q8NI22 146 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 DCAKDQ8WVC6 231 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 MAFIPQ8WZ33 124 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 YIPF5Q969M3 257 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 CPNE2Q96FN4 548 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 SPACA5Q96QH8 159 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 RTBDNQ9BSG5 229 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 DCSTAMPQ9H295 470 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 POMKQ9H5K3 350 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 RPP21Q9H633 154 aaKnown RBP2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 C11orf49Q9H6J7 331 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 OPTCQ9UBM4 332 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 SLC22A7Q9Y694 548 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 CCDC144AA2RUR9 1427 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 PCF11O94913 1555 aaKnown RBP2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 CAMTA1Q9Y6Y1 1673 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
HMGB1P38-201ENST00000490557 ADAMTSL3P82987 1691 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 PALLDQ8WX93 1383 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 PGPA6NDG6 321 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR6C6A6NF89 314 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 BTNL10A8MVZ5 291 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 D6RAR5 112 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR7C1O76099 320 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 HBZP02008 142 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 REG1AP05451 166 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR4A8P0C604 315 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 CXCL2P19875 107 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 CXCL3P19876 107 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 PRTN3P24158 256 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR1E2P47887 323 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 TCTAP57738 103 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 C1QTNF8P60827 252 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 EMX1Q04741 257 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 PAFAH1B3Q15102 231 aaKnown RBP2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 N4BP2L1Q5TBK1 243 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 SPATA31B1PQ5VZV4 182 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 DNAJC24Q6P3W2 148 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 OPN5Q6U736 354 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 SCGB1D4Q6XE38 83 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 Q6ZSR6 202 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 GLT6D1Q7Z4J2 308 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 CALHM3Q86XJ0 350 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF676Q8N7Q3 588 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 TNFAIP8L1Q8WVP5 186 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 CCL17Q92583 94 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 MRPL48Q96GC5 212 aaKnown RBP2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 AIF1LQ9BQI0 150 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMEM243Q9BU79 118 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 SCRT1Q9BWW7 348 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR51I2Q9H344 312 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZSCAN16Q9H4T2 348 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 HMG20AQ9NP66 347 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 BIN3Q9NQY0 253 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 CMTM6Q9NX76 183 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 ERGIC3Q9Y282 383 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 INSIG2Q9Y5U4 225 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 TMEM14AQ9Y6G1 99 aa2.8□□□□□ -1.96
HMGB1P38-201ENST00000490557 CLUHO75153 1309 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 TRAV8-3A0A0A6YYJ7 113 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 TRAV19A0A0A6YYK7 116 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 IGKV1-8A0A0C4DH67 115 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 LOC389332A0A1B0GUA5 103 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ZNF729A6NN14 1252 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR11H12B2RN74 326 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 PPP5D1E7EU14 171 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 C15orf65H3BRN8 121 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 K7EPK0 472 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 K7EQS6 105 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 M0QYV0 167 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 M0R1X1 148 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 ATG12O94817 140 aa2.79□□□□□ -1.96
HMGB1P38-201ENST00000490557 OR2A4O95047 310 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms