RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNF660Q6AZW8 331 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 LIN54Q6MZP7 749 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 RPL13AP3Q6NVV1 102 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 FAHD1Q6P587 224 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 DEGS2Q6QHC5 323 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 ZNF565Q8N9K5 539 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 NPBQ8NG41 125 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 RP9Q8TA86 221 aaKnown RBP5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 C11orf45Q8TAV5 145 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 MRGPRDQ8TDS7 321 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 MFFQ9GZY8 342 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 CMTM6Q9NX76 183 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 FAM32AQ9Y421 112 aaKnown RBP5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 AGRNO00468 2067 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 EPM2AB3EWF7 344 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 LOC110117498-PIK3R3F6TDL0 507 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 SHOXO15266 292 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 MITFO75030 526 aaPredicted RBP5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 E2F6O75461 281 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 NPPAP01160 153 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 ZNF44P15621 663 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 CCL1P22362 96 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 IL3RAP26951 378 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 C21orf33P30042 268 aaPredicted RBP5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 HCCSP53701 268 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 MFAP2P55001 183 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 KIR3DS1Q14943 382 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 CDK5R1Q15078 307 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 RSBN1Q5VWQ0 802 aaPredicted RBP5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 SLC25A48Q6ZT89 311 aaKnown RBP5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 SLC16A13Q7RTY0 426 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 ELMOD2Q8IZ81 293 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 POM121L12Q8N7R1 296 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 CHST4Q8NCG5 386 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 ZNF439Q8NDP4 499 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 LFNGQ8NES3 379 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 GNPDA2Q8TDQ7 276 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 STON2Q8WXE9 905 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 RCN3Q96D15 328 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 C18orf15Q96N68 181 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 BTBD10Q9BSF8 475 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 FAM103A1Q9BTL3 118 aaKnown RBP5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 TSSK6Q9BXA6 273 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 BARHL1Q9BZE3 327 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 TINAGL1Q9GZM7 467 aaPredicted RBP5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 CHST5Q9GZS9 411 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 C11orf68Q9H3H3 251 aaKnown RBP5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 CMC2Q9NRP2 79 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 GFOD1Q9NXC2 390 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 C11orf21Q9P2W6 132 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 GAB2Q9UQC2 676 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 ERGIC3Q9Y282 383 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 DNAH8Q96JB1 4490 aa5.22□□□□□ -1.57
PDLIM1-203ENST00000490391 TRAV39A0A0B4J263 110 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 TRAV24A0A0B4J272 114 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 IGKV1-9A0A0C4DH69 117 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 RIIAD1A6NNX1 92 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 C15orf65H3BRN8 121 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 FCN1O00602 326 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 UBE2CO00762 179 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 MRASO14807 208 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 MAGEB3O15480 346 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 AIREO43918 545 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 KDM4BO94953 1096 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 GADD45GO95257 159 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 SEMG1P04279 462 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 ZNF3P17036 446 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 IFNGR2P38484 337 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 NUDT2P50583 147 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 ZNF134P52741 427 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 APOC4P55056 127 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 ROM1Q03395 351 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 SCN1BQ07699 218 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 TMEM267Q0VDI3 215 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 SF3A3Q12874 501 aaKnown RBP eCLIP5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 ZNF829Q3KNS6 432 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 ZNF343Q6P1L6 599 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 UNQ5815/PRO19632Q6UWF5 114 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 RASSF6Q6ZTQ3 369 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 PPP1R27Q86WC6 154 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 POC5Q8NA72 575 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 OR2T33Q8NG76 320 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 OR52M1Q8NGK5 317 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 PLPPR1Q8TBJ4 325 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 BORCS8Q96FH0 119 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 RDH12Q96NR8 316 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 ZNF251Q9BRH9 671 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 DGCR6LQ9BY27 220 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 INTS9Q9NV88 658 aaKnown RBP5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 PEMTQ9UBM1 199 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 PEF1Q9UBV8 284 aaKnown RBP5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 BAIAP2Q9UQB8 552 aa5.21□□□□□ -1.58
PDLIM1-203ENST00000490391 IGHV4-4A0A075B6R2 117 aa5.2□□□□□ -1.58
PDLIM1-203ENST00000490391 C13orf42A0A1B0GVH6 325 aa5.2□□□□□ -1.58
PDLIM1-203ENST00000490391 HSPB6O14558 160 aa5.2□□□□□ -1.58
PDLIM1-203ENST00000490391 LANCL1O43813 399 aa5.2□□□□□ -1.58
PDLIM1-203ENST00000490391 ZNF254O75437 659 aa5.2□□□□□ -1.58
PDLIM1-203ENST00000490391 RBMXL2O75526 392 aaKnown RBP5.2□□□□□ -1.58
PDLIM1-203ENST00000490391 GATBO75879 557 aaKnown RBP5.2□□□□□ -1.58
PDLIM1-203ENST00000490391 CYB5AP00167 134 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms