RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 RAB3CQ96E17 227 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 MDFIQ99750 246 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 ATG5Q9H1Y0 275 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 ELF5Q9UKW6 265 aaPredicted RBP11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 F2RL2O00254 374 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 IGHV4-59P01825 116 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 HBZP02008 142 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 FBP1P09467 338 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 HIST1H1DP16402 221 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 SCAND1P57086 179 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 UBA52P62987 128 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 ZDHHC16Q969W1 377 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 TAF9BQ9HBM6 251 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 RHBDL2Q9NX52 303 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 FAM96BQ9Y3D0 163 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 ETV7Q9Y603 341 aa11.65□□□□□ -0.54
SRGAP3-208ENST00000490348 TRBV6-6A0A0A6YYG2 114 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 METTL21EPA6NDL7 271 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 CLDN34H7C241 214 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 IER3P46695 156 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 C6orf183Q5T699 404 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 CLVS1Q8IUQ0 354 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 PRR18Q8N4B5 295 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 BEND2Q8NDZ0 799 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 SPATA2Q9UM82 520 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 PSG11Q9UQ72 335 aa11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 TBL2Q9Y4P3 447 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-208ENST00000490348 A0A075B6Q4 140 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 SDCBPO00560 298 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 TMEM127O75204 238 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 LGALS4P56470 323 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 SPCS2Q15005 226 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 HMGN3Q15651 99 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 CROCCP3Q8IVE0 287 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 JMJD8Q96S16 334 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 CHIAQ9BZP6 476 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 MEGF9Q9H1U4 602 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 DCSTAMPQ9H295 470 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 C12orf4Q9NQ89 552 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 TNFRSF19Q9NS68 423 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 GFOD1Q9NXC2 390 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 ABRACLQ9P1F3 81 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 SCOCQ9UIL1 159 aa11.63□□□□□ -0.55
SRGAP3-208ENST00000490348 A0A1W2PPE3 182 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 J3QR06 171 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 GNG10P50151 68 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 GNMTQ14749 295 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 FAM189A2Q15884 450 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 SSX2Q16385 188 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 HLA-DRB5Q30154 266 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 TRAT1Q6PIZ9 186 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 ZNF554Q86TJ5 538 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 OR52M1Q8NGK5 317 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 OR9G1Q8NH87 305 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 PIFOQ8TCI5 191 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 TAF15Q92804 592 aaKnown RBP eCLIP11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 CMSS1Q9BQ75 279 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 RIMS4Q9H426 269 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 CHMP1AQ9HD42 196 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 Q9N2K0 584 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 SLC31A2O15432 143 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 SPINT2O43291 252 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 HTR1DP28221 377 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 ZNF134P52741 427 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 CDNFQ49AH0 187 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 MINOS1Q5TGZ0 78 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 ZNF439Q8NDP4 499 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 OR52L2PQ8NGH6 319 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 OR10V1Q8NGI7 309 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 SETD6Q8TBK2 473 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 ZNF596Q8TC21 504 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 MALSU1Q96EH3 234 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 MMP28Q9H239 520 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 KCNIP1Q9NZI2 227 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 HILPDAQ9Y5L2 63 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 MINOS1-NBL1R4GNA1 71 aa11.62□□□□□ -0.55
SRGAP3-208ENST00000490348 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 FCGR3AP08637 254 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 TMBIM6P55061 237 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 DIAPH2-AS1Q14236 149 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 ZNF260Q3ZCT1 412 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 PLA1AQ53H76 456 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 MOB1BQ7L9L4 216 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 FAM216AQ8WUB2 273 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 RAB2BQ8WUD1 216 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 ZFAND2BQ8WV99 257 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 KCTD12Q96CX2 325 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 SSX3Q99909 188 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 ABCG5Q9H222 651 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 DPM3Q9P2X0 92 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms