RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 J3QLI3 93 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 YKT6O15498 198 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 RAB36O95755 333 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 LIMS3P0CW19 117 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 LIMS4P0CW20 117 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 GABRA3P34903 492 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 RCVRNP35243 200 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 ACTR1BP42025 376 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 MAGEA6P43360 314 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 OR2B6P58173 313 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 DYNLL1P63167 89 aaKnown RBP1.56□□□□□ -2.16
CD46-216ENST00000490278 USF2Q15853 346 aaPredicted RBP1.56□□□□□ -2.16
CD46-216ENST00000490278 ZBTB6Q15916 424 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 EBLN2Q6P2I7 272 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 ZBTB8OSQ8IWT0 167 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 TCAIMQ8N3R3 496 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 DNAAF3Q8N9W5 541 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 OR5D18Q8NGL1 313 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 OR11L1Q8NGX0 322 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 GALMQ96C23 342 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 KLF6Q99612 283 aaPredicted RBP1.56□□□□□ -2.16
CD46-216ENST00000490278 CHMP5Q9NZZ3 219 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 WASHC3Q9Y3C0 194 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 MTCH2Q9Y6C9 303 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 KIAA0232Q92628 1395 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 DOCK6Q96HP0 2047 aa1.56□□□□□ -2.16
CD46-216ENST00000490278 SHANK3Q9BYB0 1731 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 IGSF23A1L1A6 192 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 B4DEV8 164 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 J3QKU1 62 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 K7EQS6 105 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 K7ERQ8 282 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 PHYHO14832 338 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 CYTH3O43739 400 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 CDK14O94921 469 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 FBP1P09467 338 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 CTSEP14091 401 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 PSMA1P25786 263 aaKnown RBP1.55□□□□□ -2.16
CD46-216ENST00000490278 GABARAPL2P60520 117 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 FOXF1Q12946 379 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 SYCP1Q15431 976 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 TMEM176BQ3YBM2 270 aaPredicted RBP1.55□□□□□ -2.16
CD46-216ENST00000490278 ACSBG2Q5FVE4 666 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 HENMT1Q5T8I9 393 aaKnown RBP1.55□□□□□ -2.16
CD46-216ENST00000490278 MTERF4Q7Z6M4 381 aaKnown RBP1.55□□□□□ -2.16
CD46-216ENST00000490278 ZFAND2AQ8N6M9 145 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 OR4P4Q8NGL7 312 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 PPWD1Q96BP3 646 aaKnown RBP1.55□□□□□ -2.16
CD46-216ENST00000490278 EBNA1BP2Q99848 306 aaKnown RBP1.55□□□□□ -2.16
CD46-216ENST00000490278 C11orf49Q9H6J7 331 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 METTL17Q9H7H0 456 aaPredicted RBP1.55□□□□□ -2.16
CD46-216ENST00000490278 TMEM106BQ9NUM4 274 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 CRB1P82279 1406 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 PTPRKQ15262 1439 aa1.55□□□□□ -2.16
CD46-216ENST00000490278 KMT2EQ8IZD2 1858 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 UGT2B11O75310 529 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 GP1BAP07359 652 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 SPAM1P38567 509 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 RBM48Q5RL73 367 aaKnown RBP1.54□□□□□ -2.16
CD46-216ENST00000490278 VN1R4Q7Z5H5 301 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 C17orf78Q8N4C9 275 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 ZNRF2Q8NHG8 242 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 SCML1Q9UN30 329 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 CCL26Q9Y258 94 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 OR51B4Q9Y5P0 310 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 COL18A1P39060 1754 aa1.54□□□□□ -2.16
CD46-216ENST00000490278 H3BSA7 217 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 CRYGDP07320 174 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 OR4A8P0C604 315 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 CPMP14384 443 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 SYT1P21579 422 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 GADD45AP24522 165 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 BLVRBP30043 206 aaPredicted RBP1.53□□□□□ -2.16
CD46-216ENST00000490278 AKR1C2P52895 323 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 GTF2BQ00403 316 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 DEFA6Q01524 100 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 BSPH1Q075Z2 132 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 HTR4Q13639 388 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 MAPK14Q16539 360 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 CENPWQ5EE01 88 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 TTC33Q6PID6 262 aaPredicted RBP1.53□□□□□ -2.16
CD46-216ENST00000490278 SDIM1Q6ZPB5 146 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 Q6ZRU5 148 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 ZNF767PQ75MW2 155 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 C2orf73Q8N5S3 287 aaPredicted RBP1.53□□□□□ -2.16
CD46-216ENST00000490278 OR4C16Q8NGL9 310 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 OR5K1Q8NHB7 308 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 ANGPTL6Q8NI99 470 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 SUN5Q8TC36 379 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 CAPZA3Q96KX2 299 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 FAM210AQ96ND0 272 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 UGT2B28Q9BY64 529 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 CHST5Q9GZS9 411 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 TREM1Q9NP99 234 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 TMEM216Q9P0N5 145 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 HEY1Q9Y5J3 304 aa1.53□□□□□ -2.16
CD46-216ENST00000490278 LCTP09848 1927 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 TRPM3Q9HCF6 1732 aaPredicted RBP1.52□□□□□ -2.17
CD46-216ENST00000490278 MAP3K19Q56UN5 1328 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 ODF3BA8MYP8 253 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 267.8 ms