RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 OR8D2Q9GZM6 311 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 IL22Q9GZX6 179 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 PCBD2Q9H0N5 130 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 DUSP21Q9H596 190 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 ASB7Q9H672 318 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 CWH43Q9H720 699 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 KCNJ16Q9NPI9 418 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 FBXO6Q9NRD1 293 aaPredicted RBP1.59□□□□□ -2.15
HMGN1-218ENST00000490032 AGPAT4Q9NRZ5 378 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 SLC35D1Q9NTN3 355 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 COA4Q9NYJ1 87 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 GSKIPQ9P0R6 139 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 XCL2Q9UBD3 114 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 PITPNC1Q9UKF7 332 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 FLVCR2Q9UPI3 526 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 COQ4Q9Y3A0 265 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 OR51B4Q9Y5P0 310 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 U3KQV3 271 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 MON2Q7Z3U7 1717 aa1.59□□□□□ -2.16
HMGN1-218ENST00000490032 CASP8AP2Q9UKL3 1982 aa1.59□□□□□ -2.16
HMGN1-218ENST00000490032 NFASCO94856 1347 aa1.59□□□□□ -2.16
HMGN1-218ENST00000490032 DLEC1Q9Y238 1755 aa1.59□□□□□ -2.16
HMGN1-218ENST00000490032 PCNX2A6NKB5 2137 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 DICER1Q9UPY3 1922 aaKnown RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 MRC1P22897 1456 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 COL5A3P25940 1745 aaPredicted RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF407Q9C0G0 2248 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 CITO14578 2027 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 LTN1O94822 1766 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 SCN11AQ9UI33 1791 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 IGLV1-50A0A075B6I6 118 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 A0A1W2PQL4 384 aaPredicted RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 XKRY2A2RUG3 117 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 SLC22A20A6NK97 555 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 GABRR3A8MPY1 467 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 A8MUU9 505 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 F6UZH7 168 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 INS-IGF2F8WCM5 200 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 TRAPPC2LH3BP13 241 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 APOC4-APOC2K7ER74 178 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 MFNGO00587 321 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 XKRYO14609 159 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 GOSR2O14653 212 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 CLDN3O15551 220 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 RBFOX2O43251 390 aaKnown RBP eCLIP1.58□□□□□ -2.161e-18■□□□□ 8.3
HMGN1-218ENST00000490032 COCHO43405 550 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 CBR3O75828 277 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ARL6IP5O75915 188 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 PROSCO94903 275 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 GADD45GO95257 159 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 FARS2O95363 451 aaKnown RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 APOC2P02655 101 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 TCRBP04435 133 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 IL5P05113 134 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 GLAP06280 429 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 DBIP07108 87 aaKnown RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 GUSBP08236 651 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 LINC00032P0C843 101 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 SMIM10L1P0DMW3 83 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 OR5H8P0DN80 308 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 TPT1P13693 172 aaKnown RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 HIST1H1BP16401 226 aaKnown RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 TCN2P20062 427 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 GSTM3P21266 225 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 CD82P27701 267 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 OR10J1P30954 320 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 MPIP34949 423 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 CEACAM6P40199 344 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 CSKP41240 450 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 KIR3DL2P43630 455 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 MAP2K4P45985 399 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 RABIFP47224 123 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 P2RY1P47900 373 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 RFX3P48380 749 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 EVX1P49640 407 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 NDUFA6P56556 154 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 TAS2R43P59537 309 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 GPX6P59796 221 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 UBE2G2P60604 165 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ACTBP60709 375 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 NUTF2P61970 127 aaKnown RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 RAP1AP62834 184 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ACTG1P63261 375 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 SELENOWP63302 87 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 PAFAH1B2P68402 229 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 EMX2Q04743 252 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 SSBP1Q04837 148 aaKnown RBP1.58□□□□□ -2.16
HMGN1-218ENST00000490032 TNFRSF9Q07011 255 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 SYCNQ0VAF6 134 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 IL24Q13007 206 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ECH1Q13011 328 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ILKQ13418 452 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF235Q14590 738 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 MAPK14Q16539 360 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 PSG3Q16557 428 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 PGGHGQ32M88 737 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ARHGAP11BQ3KRB8 267 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 TTLL9Q3SXZ7 439 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 SCGB2B2Q4G0G5 96 aa1.58□□□□□ -2.16
HMGN1-218ENST00000490032 ATP6AP1LQ52LC2 224 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms