RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 DKK4Q9UBT3 224 aa13.14□□□□□ -0.31
PTK7-216ENST00000489707 IFNA4P05014 189 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 NBL1P41271 181 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 RAB5CP51148 216 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 FOXF2Q12947 444 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 ZNF266Q14584 549 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 NMSQ5H8A3 153 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 MBNL2Q5VZF2 373 aaKnown RBP13.13□□□□□ -0.31
PTK7-216ENST00000489707 Q6ZS92 163 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 OR2C3Q8N628 320 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 ZNF610Q8N9Z0 462 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 TINAGQ9UJW2 476 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 INTS1Q8N201 2190 aaKnown RBP13.13□□□□□ -0.31
PTK7-216ENST00000489707 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 ARID1AO14497 2285 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 TMEM30CPA0ZSE6 113 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 TMEM218A2RU14 115 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 RNF212BA8MTL3 300 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.13□□□□□ -0.31
PTK7-216ENST00000489707 WRBO00258 174 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 ATG12O94817 140 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 CGAP01215 116 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 LMO1P25800 156 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 MEOX2P50222 304 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 RAB13P51153 203 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 DEFA5Q01523 94 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 ALKBH6Q3KRA9 238 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 DMBX1Q8NFW5 382 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 GINS3Q9BRX5 216 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 SMIM3Q9BZL3 60 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 ESRP2Q9H6T0 727 aaKnown RBP13.13□□□□□ -0.31
PTK7-216ENST00000489707 PLEKHF2Q9H8W4 249 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 LIN7CQ9NUP9 197 aaKnown RBP13.13□□□□□ -0.31
PTK7-216ENST00000489707 MLXQ9UH92 298 aa13.13□□□□□ -0.31
PTK7-216ENST00000489707 RBM7Q9Y580 266 aaKnown RBP13.13□□□□□ -0.31
PTK7-216ENST00000489707 A6NLC8 198 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 ADAM20O43506 726 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 FBXO24O75426 580 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 CD200P41217 278 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
PTK7-216ENST00000489707 HMGN3Q15651 99 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 SMIM21Q3B7S5 101 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 SVBPQ8N300 66 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 PRSS33Q8NF86 280 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 SNIP1Q8TAD8 396 aaKnown RBP13.12□□□□□ -0.31
PTK7-216ENST00000489707 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 ERGIC1Q969X5 290 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 OPN3Q9H1Y3 402 aaPredicted RBP13.12□□□□□ -0.31
PTK7-216ENST00000489707 LUZP4Q9P127 313 aa13.12□□□□□ -0.31
PTK7-216ENST00000489707 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
PTK7-216ENST00000489707 IGHV2OR16-5A0A0B4J2B6 119 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 A0A1B0GU03 582 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 TM4SF5O14894 197 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 MLNRO43193 412 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 SPINK2P20155 84 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 CAV2P51636 162 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 BAXQ07812 192 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 C3orf36Q3SXR2 165 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 SLC35E4Q6ICL7 350 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 COMMD1Q8N668 190 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 BOLLQ8N9W6 283 aaKnown RBP13.11□□□□□ -0.31
PTK7-216ENST00000489707 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 OR14J1Q9UGF5 321 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 IGHV1-18A0A0C4DH31 117 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 OOEPA6NGQ2 149 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 H0YL77 283 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 EWSR1Q01844 656 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTK7-216ENST00000489707 KRTCAP3Q53RY4 240 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
PTK7-216ENST00000489707 RNASE11Q8TAA1 199 aaKnown RBP13.11□□□□□ -0.31
PTK7-216ENST00000489707 GALMQ96C23 342 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 TSNAXQ99598 290 aaKnown RBP13.11□□□□□ -0.31
PTK7-216ENST00000489707 TREM1Q9NP99 234 aa13.11□□□□□ -0.31
PTK7-216ENST00000489707 LYRM2Q9NU23 88 aaPredicted RBP13.11□□□□□ -0.31
PTK7-216ENST00000489707 STRAPQ9Y3F4 350 aaKnown RBP13.11□□□□□ -0.31
PTK7-216ENST00000489707 C1QTNF9BB2RNN3 333 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 WISP2O76076 250 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 SPP1P10451 314 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 FABP6P51161 128 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 AKR1D1P51857 326 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 ID3Q02535 119 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 MST1LQ2TV78 715 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 TIMM23BQ5SRD1 257 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 C10orf91Q5T1B1 145 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 C1orf185Q5T7R7 199 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 C5orf24Q7Z6I8 188 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 PRR18Q8N4B5 295 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 ZBTB34Q8NCN2 500 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 LSM10Q969L4 123 aaKnown RBP13.1□□□□□ -0.31
PTK7-216ENST00000489707 OR1A1Q9P1Q5 309 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 SLC25A15Q9Y619 301 aa13.1□□□□□ -0.31
PTK7-216ENST00000489707 A0A1B0GWJ7 208 aa13.09□□□□□ -0.31
PTK7-216ENST00000489707 TNFSF12O43508 249 aa13.09□□□□□ -0.31
PTK7-216ENST00000489707 SSSCA1O60232 199 aa13.09□□□□□ -0.31
PTK7-216ENST00000489707 PITX3O75364 302 aa13.09□□□□□ -0.31
PTK7-216ENST00000489707 HEXAP06865 529 aa13.09□□□□□ -0.31
PTK7-216ENST00000489707 TIMP3P35625 211 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms