RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 WDR54Q9H977 334 aa1.02□□□□□ -2.25
CPSF3-205ENST00000489629 USP42Q9H9J4 1324 aaKnown RBP1.02□□□□□ -2.25
CPSF3-205ENST00000489629 DMAC2Q9NW81 257 aa1.02□□□□□ -2.25
CPSF3-205ENST00000489629 C14orf166Q9Y224 244 aaKnown RBP1.02□□□□□ -2.25
CPSF3-205ENST00000489629 C15orf41Q9Y2V0 281 aa1.02□□□□□ -2.25
CPSF3-205ENST00000489629 DSCAMO60469 2012 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 TRPM3Q9HCF6 1732 aaPredicted RBP1.01□□□□□ -2.25
CPSF3-205ENST00000489629 ARAP3Q8WWN8 1544 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 NUP153P49790 1475 aaKnown RBP1.01□□□□□ -2.25
CPSF3-205ENST00000489629 RAD50Q92878 1312 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 TMEM213A2RRL7 107 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 GOLGA8IPA6NC78 632 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 OR5H14A6NHG9 310 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 GGTLC3B5MD39 225 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 ZNF878C9JN71 531 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 K7ERS5 55 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 ITGB1BP1O14713 200 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 CETN3O15182 167 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 TOX3O15405 576 aaPredicted RBP1.01□□□□□ -2.25
CPSF3-205ENST00000489629 ATP8B1O43520 1251 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 SYNGR1O43759 233 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 POP7O75817 140 aaKnown RBP1.01□□□□□ -2.25
CPSF3-205ENST00000489629 RAB36O95755 333 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 MLNP12872 115 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 ZNF708P17019 499 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 ADORA1P30542 326 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 RPL14P50914 215 aaKnown RBP1.01□□□□□ -2.25
CPSF3-205ENST00000489629 DLX6P56179 175 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 TNFRSF9Q07011 255 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 DHRS2Q13268 280 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 GOLGA7BQ2TAP0 167 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 SPATA31B1PQ5VZV4 182 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 FAM45BPQ6NSW5 357 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 SMARCD3Q6STE5 483 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 SPNS3Q6ZMD2 512 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 SSX7Q7RTT5 188 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 TCF23Q7RTU1 214 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 OLIG3Q7RTU3 272 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 VN1R4Q7Z5H5 301 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 DOLPP1Q86YN1 238 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 IQCF2Q8IXL9 164 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 C2orf73Q8N5S3 287 aaPredicted RBP1.01□□□□□ -2.25
CPSF3-205ENST00000489629 KRTCAP2Q8N6L1 136 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 ACBD4Q8NC06 268 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 LFNGQ8NES3 379 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 BPIFB6Q8NFQ5 453 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 OR11G2Q8NGC1 345 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 OR5D18Q8NGL1 313 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 OR5L1Q8NGL2 311 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 OR9I1Q8NGQ6 314 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 MUC7Q8TAX7 377 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 CMTM2Q8TAZ6 248 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 KCTD4Q8WVF5 259 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 APOBEC3DQ96AK3 386 aaPredicted RBP1.01□□□□□ -2.25
CPSF3-205ENST00000489629 PYURFQ96I23 114 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 MBOAT7Q96N66 472 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 OTOFQ9HC10 1997 aa1.01□□□□□ -2.25
CPSF3-205ENST00000489629 CRB1P82279 1406 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 KMT2BQ9UMN6 2715 aaPredicted RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 CLUHO75153 1309 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 IGLV10-54A0A075B6I4 117 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 A0A1B0GU33 70 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 FTCDNL1E5RQL4 147 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 LECT2O14960 151 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 PSIP1O75475 530 aaKnown RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 ATP6V1G2O95670 118 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 PDYNP01213 254 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 LTAP01374 205 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 ORM1P02763 201 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 CD99P14209 185 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 PVALBP20472 110 aaPredicted RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 PSMB9P28065 219 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 CD40LGP29965 261 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 ACTR1BP42025 376 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 PSMD8P48556 350 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 EMP2P54851 167 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 SKP2Q13309 424 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 PDGFRLQ15198 375 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 LRRC26Q2I0M4 334 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 LGALSLQ3ZCW2 172 aaPredicted RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 CENPWQ5EE01 88 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 HENMT1Q5T8I9 393 aaKnown RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 EBLN2Q6P2I7 272 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 DRAM2Q6UX65 266 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 SCXQ7RTU7 201 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 MTERF4Q7Z6M4 381 aaKnown RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 FAM9CQ8IZT9 166 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 EIF4E3Q8N5X7 224 aaKnown RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 TMEM75Q8N9X5 138 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 Q8NAQ8 132 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 OR4P4Q8NGL7 312 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 OR5AK3PQ8NH89 298 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 DDI1Q8WTU0 396 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 PPCDCQ96CD2 204 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 LRRC45Q96CN5 670 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 TRIB3Q96RU7 358 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 KLF6Q99612 283 aaPredicted RBP1□□□□□ -2.25
CPSF3-205ENST00000489629 ZNF286AQ9HBT8 521 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 LINC00588Q9Y4M8 146 aa1□□□□□ -2.25
CPSF3-205ENST00000489629 CACNA1AO00555 2505 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms